Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.99□□□□□ -1.93
CCSER1Q9C0I3 AC004696.1-201ENST00000614345 607 ntBASIC2.99□□□□□ -1.93
CCSER1Q9C0I3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.99□□□□□ -1.93
CCSER1Q9C0I3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.99□□□□□ -1.93
CCSER1Q9C0I3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.99□□□□□ -1.93
CCSER1Q9C0I3 LRRC77P-213ENST00000637727 880 ntBASIC2.99□□□□□ -1.93
CCSER1Q9C0I3 OR5H6-203ENST00000642105 978 ntBASIC2.99□□□□□ -1.93
CCSER1Q9C0I3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 SNORD116.1-201ENST00000365628 92 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 RNU6-637P-201ENST00000384050 107 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 RNU6-198P-201ENST00000384258 104 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 MIR592-201ENST00000384959 97 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 MIR514A1-201ENST00000385133 98 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AL953862.1-201ENST00000423016 168 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 CR769776.1-201ENST00000441254 787 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC002381.1-201ENST00000447049 280 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 ST13P20-201ENST00000447996 1065 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 MTND4LP3-201ENST00000468320 276 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC009901.1-201ENST00000506703 541 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC024589.1-201ENST00000512207 263 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 SETP2-201ENST00000553886 926 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 CYCSP2-201ENST00000558168 301 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AMZ2P1-203ENST00000565833 850 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 MIR4635-201ENST00000583759 79 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC090132.2-201ENST00000615881 347 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC006386.1-201ENST00000619436 415 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC068880.5-201ENST00000624331 290 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AP000526.1-201ENST00000603308 1388 ntBASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.98□□□□□ -1.93
CCSER1Q9C0I3 AC092447.7-201ENST00000422212 1621 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC011477.1-204ENST00000623416 1325 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 RNU1-105P-201ENST00000363470 161 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 SNORA5B-201ENST00000363786 132 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 Y_RNA.465-201ENST00000384293 102 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 RNA5SP492-201ENST00000411330 114 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 MTND1P21-201ENST00000412991 285 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC008850.1-201ENST00000427546 362 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AL512844.2-201ENST00000433990 593 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC129850.1-201ENST00000436203 508 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 USP9YP10-201ENST00000454868 628 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC021382.1-201ENST00000483523 359 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AL049874.1-201ENST00000489560 388 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC147055.4-201ENST00000504399 745 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 RNU6-150P-201ENST00000516237 95 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 RNA5SP282-201ENST00000516355 108 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 RNA5SP291-201ENST00000517222 105 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 MTND4P33-201ENST00000556706 766 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 MTCO3P13-201ENST00000577757 781 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC022662.1-201ENST00000580252 331 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 MIR3162-201ENST00000581818 82 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 U73023.1-201ENST00000603134 700 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 DUXAP3-201ENST00000603616 594 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AL359198.2-201ENST00000611836 194 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC107075.1-201ENST00000613695 314 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC013476.2-201ENST00000614456 459 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC002064.3-201ENST00000623448 346 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC073308.1-201ENST00000623696 305 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 AC092447.10-201ENST00000620607 1652 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 DDX10P1-201ENST00000448545 1933 ntBASIC2.97□□□□□ -1.93
CCSER1Q9C0I3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CCSER1Q9C0I3 AL365361.1-201ENST00000566942 3481 ntBASIC2.96□□□□□ -1.93
CCSER1Q9C0I3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AL049641.1-201ENST00000441055 1948 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC062016.1-201ENST00000355719 319 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 MIR513B-201ENST00000385136 84 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 ELOCP9-201ENST00000418624 239 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 HMGN2P30-201ENST00000423237 256 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 OR4K11P-201ENST00000431829 904 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 ARPC3P1-201ENST00000437218 533 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AC011816.1-201ENST00000441346 546 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 MTND5P14-201ENST00000441481 1267 ntBASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCSER1Q9C0I3 PTENP1-201ENST00000447117 1215 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms