Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AC090115.3-201ENST00000553218 849 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 MTCO3P23-201ENST00000561363 289 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AC091178.1-203ENST00000584586 279 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AL512643.1-201ENST00000635735 524 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 Z99571.1-201ENST00000636677 394 ntBASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM55Q9BYV6 AL133412.1-201ENST00000380194 2992 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC007685.1-201ENST00000329806 452 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 EIF4E2P1-201ENST00000393781 255 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 SNORA11-201ENST00000408789 128 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AL590383.1-201ENST00000428602 75 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 RNU7-167P-201ENST00000459160 62 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC083829.1-201ENST00000503756 657 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC104136.1-201ENST00000512969 394 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 RNU6-864P-201ENST00000516256 108 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 Y_RNA.675-201ENST00000516389 149 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC090136.1-201ENST00000520009 240 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 ATP1B3P1-201ENST00000605365 821 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC103710.3-201ENST00000608157 948 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 AC006023.2-201ENST00000609916 167 ntBASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM55Q9BYV6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 MARK2P15-201ENST00000432204 2186 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 SNORD113-7-201ENST00000363762 77 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 SNORA4.3-201ENST00000365564 137 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RNU6-741P-201ENST00000383889 107 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AL590762.2-201ENST00000395798 571 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RNU2-33P-201ENST00000410344 192 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC007919.1-201ENST00000429380 217 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RPS6P12-201ENST00000432491 726 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 NDUFA5P4-201ENST00000436704 385 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 HMGB1P18-201ENST00000438801 619 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AL121877.1-201ENST00000453704 622 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RPL12P20-201ENST00000475538 479 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RPS15AP34-201ENST00000487776 387 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC025164.1-201ENST00000496249 478 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC025445.1-201ENST00000502728 300 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RNU2-58P-201ENST00000516403 183 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 RNA5SP468-201ENST00000516782 93 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 IGKV1-32-201ENST00000519290 311 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 IGLV3-26-201ENST00000520756 302 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 ATP5F1P5-201ENST00000526403 760 ntBASIC4.61□□□□□ -1.67
TRIM55Q9BYV6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms