Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC092641.1-201ENST00000440229 772 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX3Q99909 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX3Q99909 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.88□□□□□ -1.95
SSX3Q99909 AC010486.2-201ENST00000505572 483 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 AF131216.2-201ENST00000512316 564 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 SNORA70.18-201ENST00000516696 98 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 RNU6-1282P-201ENST00000516735 96 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 RNU6-579P-201ENST00000516879 102 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 RNU6-1003P-201ENST00000517099 105 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 AC245166.1-201ENST00000521012 253 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX3Q99909 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.88□□□□□ -1.95
SSX3Q99909 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX3Q99909 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.88□□□□□ -1.95
SSX3Q99909 MTND3P12-201ENST00000559068 328 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX3Q99909 AC010620.2-201ENST00000600135 313 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 AC103710.1-201ENST00000610003 901 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX3Q99909 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX3Q99909 AL603755.1-201ENST00000619504 163 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 AC097655.1-201ENST00000635075 318 ntBASIC2.88□□□□□ -1.95
SSX3Q99909 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX3Q99909 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SSX3Q99909 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX3Q99909 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SSX3Q99909 PABPC1P9-201ENST00000426076 1612 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX3Q99909 RNU5F-6P-201ENST00000362979 116 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 RNU5A-8P-201ENST00000364102 114 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX3Q99909 RPS20P2-201ENST00000402520 389 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AL031577.2-201ENST00000404133 280 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 MTCYBP36-201ENST00000404146 440 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 RNA5SP44-201ENST00000410446 133 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX3Q99909 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX3Q99909 USP9YP26-201ENST00000421008 661 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX3Q99909 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX3Q99909 AL714022.1-201ENST00000439897 151 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 BMI1P1-201ENST00000445879 941 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 PRDX3P3-201ENST00000447765 522 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC098826.2-201ENST00000452011 651 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 MTCO2P6-201ENST00000463134 685 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC116337.2-201ENST00000477662 156 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX3Q99909 RPF2P2-201ENST00000504693 896 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX3Q99909 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SSX3Q99909 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SSX3Q99909 NRON-201ENST00000517270 370 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 MTCO1P47-201ENST00000523889 1271 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSX3Q99909 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSX3Q99909 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.87□□□□□ -1.95
SSX3Q99909 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX3Q99909 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX3Q99909 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX3Q99909 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX3Q99909 RPL23AP78-201ENST00000599928 470 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC090970.3-201ENST00000612566 866 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC004852.3-201ENST00000614131 326 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC004696.1-201ENST00000614345 607 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 U4.6-201ENST00000621618 127 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 AC007656.2-201ENST00000624902 4547 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSX3Q99909 Z83843.1-201ENST00000604070 3685 ntBASIC2.87□□□□□ -1.95
SSX3Q99909 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX3Q99909 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.87□□□□□ -1.95
SSX3Q99909 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SSX3Q99909 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX3Q99909 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSX3Q99909 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.86□□□□□ -1.95
SSX3Q99909 RNA5SP72-201ENST00000364442 117 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SSX3Q99909 MIR183-201ENST00000384958 110 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 MIR767-201ENST00000390228 109 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 RN7SKP58-201ENST00000411010 305 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.86□□□□□ -1.95
SSX3Q99909 AL139281.1-201ENST00000422120 335 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX3Q99909 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX3Q99909 AC091390.3-201ENST00000426478 338 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX3Q99909 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX3Q99909 USP12PX-201ENST00000432383 1057 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX3Q99909 AL049734.2-201ENST00000441066 616 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 PIGFP3-201ENST00000441918 722 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AC118469.1-201ENST00000442943 488 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 CBWD4P-201ENST00000445695 655 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.86□□□□□ -1.95
SSX3Q99909 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.86□□□□□ -1.95
SSX3Q99909 AC108059.3-201ENST00000456388 214 ntBASIC2.86□□□□□ -1.95
SSX3Q99909 AL590639.1-201ENST00000456484 337 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms