Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL596028.1-201ENST00000326971 197 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 AC073264.1-201ENST00000411508 416 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 MTCYBP7-201ENST00000419540 1134 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 MORF4L1P7-201ENST00000426038 703 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 AL139109.1-201ENST00000455491 297 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.87□□□□□ -2.11
ABCA3Q99758 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.87□□□□□ -2.11
ABCA3Q99758 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.87□□□□□ -2.11
ABCA3Q99758 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.87□□□□□ -2.11
ABCA3Q99758 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.87□□□□□ -2.11
ABCA3Q99758 AC008739.2-201ENST00000597006 317 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 AC069304.3-201ENST00000603938 1084 ntBASIC1.87□□□□□ -2.11
ABCA3Q99758 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.87□□□□□ -2.11
ABCA3Q99758 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.87□□□□□ -2.11
ABCA3Q99758 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ABCA3Q99758 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA3Q99758 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ABCA3Q99758 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.86□□□□□ -2.11
ABCA3Q99758 RPL21P32-201ENST00000419877 477 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA3Q99758 RNU6-1073P-201ENST00000517182 106 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 OSBPL9P3-201ENST00000534523 595 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.86□□□□□ -2.11
ABCA3Q99758 AC109446.2-201ENST00000567872 497 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.86□□□□□ -2.11
ABCA3Q99758 AC245884.12-201ENST00000615364 59 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 AC008121.3-201ENST00000618726 433 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 AC020923.1-201ENST00000624021 917 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ABCA3Q99758 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 HNRNPDP2-201ENST00000406475 478 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 MIR548J-201ENST00000408833 112 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 PGBD4P3-201ENST00000440731 581 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA3Q99758 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.86□□□□□ -2.11
ABCA3Q99758 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.86□□□□□ -2.11
ABCA3Q99758 OR4R1P-201ENST00000529879 463 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.86□□□□□ -2.11
ABCA3Q99758 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ABCA3Q99758 FAM157B-203ENST00000639350 358 ntBASIC1.86□□□□□ -2.11
ABCA3Q99758 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.85□□□□□ -2.11
ABCA3Q99758 RNU6-1032P-201ENST00000384100 107 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 MIR1304-201ENST00000408243 91 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 RPS6P15-201ENST00000431996 751 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 HMGN1P33-201ENST00000432945 451 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ABCA3Q99758 AC090774.1-201ENST00000435925 246 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.85□□□□□ -2.11
ABCA3Q99758 AL031183.1-201ENST00000457667 207 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.85□□□□□ -2.11
ABCA3Q99758 LARP7P4-201ENST00000481075 878 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 AC113155.1-201ENST00000511141 769 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 AC023813.2-201ENST00000564321 469 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 AC083806.3-201ENST00000614016 455 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 MIR6076-201ENST00000617521 113 ntBASIC1.85□□□□□ -2.11
ABCA3Q99758 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
ABCA3Q99758 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.84□□□□□ -2.11
ABCA3Q99758 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ABCA3Q99758 AL355497.1-201ENST00000406262 551 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 RNA5SP498-201ENST00000411342 120 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.84□□□□□ -2.11
ABCA3Q99758 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.84□□□□□ -2.11
ABCA3Q99758 SNORD121B-201ENST00000458838 81 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 AP002371.1-201ENST00000463604 433 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 AC133963.2-201ENST00000513686 578 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 NPM1P52-201ENST00000518264 846 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.84□□□□□ -2.11
ABCA3Q99758 AC022634.1-201ENST00000520765 532 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.84□□□□□ -2.11
ABCA3Q99758 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.84□□□□□ -2.11
ABCA3Q99758 AC009127.3-201ENST00000570531 403 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 RPS15AP11-201ENST00000594193 385 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 AC015849.6-201ENST00000605454 474 ntBASIC1.84□□□□□ -2.11
ABCA3Q99758 AL354685.2-201ENST00000448218 1447 ntBASIC1.84□□□□□ -2.12
ABCA3Q99758 ZNF519P1-201ENST00000449011 1626 ntBASIC1.84□□□□□ -2.12
ABCA3Q99758 AC068700.1-201ENST00000565862 3754 ntBASIC1.84□□□□□ -2.12
ABCA3Q99758 AC007342.9-201ENST00000623877 1385 ntBASIC1.84□□□□□ -2.12
ABCA3Q99758 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ABCA3Q99758 MIR524-201ENST00000385242 87 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 HMGN2P38-201ENST00000423806 265 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 AC233728.2-201ENST00000425348 757 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 AC244033.1-201ENST00000426826 870 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 RABEPKP1-201ENST00000440529 1026 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 AC087879.1-201ENST00000474343 374 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 AC008427.1-201ENST00000503102 655 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 CYCSP26-201ENST00000534107 320 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.83□□□□□ -2.12
ABCA3Q99758 MTND4LP24-201ENST00000572277 291 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 AC113194.1-201ENST00000606037 500 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 AL391834.1-201ENST00000609609 560 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.83□□□□□ -2.12
ABCA3Q99758 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.83□□□□□ -2.12
ABCA3Q99758 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 U3.40-201ENST00000408706 208 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 RNU2-32P-201ENST00000411193 191 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 Z75741.2-201ENST00000417272 1167 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 RPS23P3-201ENST00000470993 430 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 HMGB3P3-201ENST00000510526 400 ntBASIC1.83□□□□□ -2.12
ABCA3Q99758 OR4V1P-201ENST00000525394 1140 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms