Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RPL23AP93-201ENST00000440847 484 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RPS17P13-201ENST00000448974 407 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RN7SL98P-201ENST00000462271 300 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RPS20P21-201ENST00000466859 343 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-27P-201ENST00000516146 107 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-1332P-201ENST00000516666 104 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-699P-201ENST00000517081 110 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 MIR4513-201ENST00000581077 86 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AC091979.2-201ENST00000607514 214 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AP001486.3-201ENST00000615334 372 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AC091925.2-201ENST00000625059 256 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 AC133552.1-201ENST00000569988 4007 ntBASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SYNGAP1Q96PV0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AL136164.3-201ENST00000624429 3978 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 SNORD3E-201ENST00000362899 217 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 SNORD70.1-201ENST00000391007 85 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-387P-201ENST00000411331 105 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC236972.1-201ENST00000433225 199 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 RPL35AP22-201ENST00000436855 335 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 HMGB3P21-201ENST00000452483 547 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC005008.1-201ENST00000456151 612 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC108751.2-201ENST00000469993 231 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 TRBV1-201ENST00000476502 284 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC116337.1-201ENST00000509680 687 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 OR8R1P-201ENST00000543943 764 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 MIR3941-201ENST00000582572 103 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AL669831.4-202ENST00000590817 238 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 AC100812.1-201ENST00000607622 580 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SYNGAP1Q96PV0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 Y_RNA.252-201ENST00000364556 101 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-1127P-201ENST00000384580 107 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AL592291.1-201ENST00000403830 352 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 RNU2-47P-201ENST00000410649 186 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 RPS15AP40-201ENST00000419621 391 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 RPL21P109-201ENST00000422213 475 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AL590632.1-201ENST00000424289 371 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 CALM2P2-201ENST00000428512 440 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC005094.1-201ENST00000440420 368 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 RPL21P23-201ENST00000446654 460 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 NUTF2P3-201ENST00000448540 384 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC239809.1-201ENST00000450470 217 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 ISCUP1-201ENST00000454451 448 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 DYNLL1P5-201ENST00000467158 270 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-388P-201ENST00000517012 105 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 RNU6-389P-201ENST00000517048 105 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC009812.2-201ENST00000517657 457 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AP005902.1-201ENST00000521358 186 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AL138889.2-201ENST00000603883 242 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 SNORD91B-202ENST00000608459 222 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC069200.1-201ENST00000609511 323 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC004696.1-201ENST00000614345 607 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC098657.3-201ENST00000620434 263 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AC026523.2-201ENST00000625039 7739 ntBASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.16□□□□□ -1.58
SYNGAP1Q96PV0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms