Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 RNA5SP90-201ENST00000364801 99 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 Y_RNA.424-201ENST00000384063 103 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 Y_RNA.485-201ENST00000384395 102 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 MIR105-1-201ENST00000385222 81 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 AL035079.1-201ENST00000405210 287 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 SNORD56-201ENST00000413522 71 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.49□□□□□ -1.53
CALR3Q96L12 AL353997.1-201ENST00000432936 108 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.49□□□□□ -1.53
CALR3Q96L12 RPS29P10-201ENST00000439197 166 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.49□□□□□ -1.53
CALR3Q96L12 FTH1P2-201ENST00000466086 412 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 AC069499.1-201ENST00000489433 509 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 AC110794.1-201ENST00000505816 425 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.49□□□□□ -1.53
CALR3Q96L12 RNU6-635P-201ENST00000516651 102 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 CBX3P8-201ENST00000532412 525 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.49□□□□□ -1.53
CALR3Q96L12 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.49□□□□□ -1.53
CALR3Q96L12 VN1R107P-201ENST00000601784 209 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 AC007390.2-201ENST00000606229 3803 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 MIR3976-201ENST00000606807 139 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.49□□□□□ -1.53
CALR3Q96L12 AC007792.1-201ENST00000623023 402 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.49□□□□□ -1.53
CALR3Q96L12 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.49□□□□□ -1.53
CALR3Q96L12 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CALR3Q96L12 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CALR3Q96L12 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.48□□□□□ -1.53
CALR3Q96L12 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 RPL9P7-201ENST00000330965 580 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CALR3Q96L12 RNA5SP335-201ENST00000363817 110 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 RNU6-702P-201ENST00000364982 107 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 Y_RNA.574-201ENST00000384766 95 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.48□□□□□ -1.53
CALR3Q96L12 AC114482.1-201ENST00000418010 247 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 PGBD4P6-201ENST00000421501 610 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AC093655.2-201ENST00000425735 631 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 RPL7P2-201ENST00000427639 268 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AL513043.1-201ENST00000439124 535 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AL353752.1-201ENST00000454946 260 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 YRDCP3-201ENST00000456507 480 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AC112492.4-201ENST00000456549 352 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 RPL9P9-202ENST00000466501 579 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AC133134.1-201ENST00000466800 359 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AC078817.1-201ENST00000492623 435 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AC105758.1-201ENST00000506038 399 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.48□□□□□ -1.53
CALR3Q96L12 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.48□□□□□ -1.53
CALR3Q96L12 HSBP1P1-201ENST00000555205 166 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AC110588.1-201ENST00000559699 137 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CALR3Q96L12 AL138825.1-201ENST00000618587 192 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AL691477.1-201ENST00000624398 162 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 AC112200.1-201ENST00000625015 234 ntBASIC5.48□□□□□ -1.53
CALR3Q96L12 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.48□□□□□ -1.53
CALR3Q96L12 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CALR3Q96L12 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.47□□□□□ -1.53
CALR3Q96L12 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CALR3Q96L12 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CALR3Q96L12 Y_RNA.48-201ENST00000362710 103 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 RNY1P16-201ENST00000363063 111 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 RNU6-1317P-201ENST00000364582 104 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 RNU6-99P-201ENST00000364721 107 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 U8.8-201ENST00000365399 135 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 SET-203ENST00000372688 801 ntTSL 2 BASIC5.47□□□□□ -1.53
CALR3Q96L12 RNU6-505P-201ENST00000384427 107 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 RNA5SP284-201ENST00000384547 118 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 RNU6-823P-201ENST00000391042 103 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CALR3Q96L12 AL591034.2-201ENST00000402839 359 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AL138885.1-201ENST00000405921 675 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 MIR1271-201ENST00000408537 86 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 RPL21P66-201ENST00000426566 466 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AC115283.1-201ENST00000427353 400 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.47□□□□□ -1.53
CALR3Q96L12 AC104634.1-201ENST00000452720 462 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AC023141.9-201ENST00000458734 412 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 U8.20-201ENST00000459445 131 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms