Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC092326.2-201ENST00000624772 1561 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MIR372-201ENST00000362225 67 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 RNU6-552P-201ENST00000362869 119 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 RNU6-1287P-201ENST00000362914 107 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 RNA5SP399-201ENST00000364003 117 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 RNU6-1181P-201ENST00000384191 106 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 SNORA24.1-201ENST00000384401 135 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 RNU6-1060P-201ENST00000384664 107 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MT-TD-201ENST00000387419 68 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 RNU6-903P-201ENST00000391270 109 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AL606923.1-201ENST00000406616 190 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 RNU6-193P-201ENST00000410977 107 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 EEF1A1P40-201ENST00000412883 573 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 CALM2P2-201ENST00000428512 440 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MTND3P16-201ENST00000452205 344 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 SNRPFP3-201ENST00000457792 225 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 VN1R105P-201ENST00000486595 910 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 OR8R1P-201ENST00000543943 764 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 GNRHR2P1-201ENST00000555315 631 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AL138976.2-201ENST00000563989 694 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MIR4703-201ENST00000577728 79 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AC093913.1-201ENST00000614178 329 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 SDR42E1P2-201ENST00000614861 481 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 AP001486.3-201ENST00000615334 372 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MTND4P29-201ENST00000503122 1372 ntBASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CTHRC1Q96CG8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 Y_RNA.11-201ENST00000362375 109 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 RNU4-66P-201ENST00000365199 138 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 SNORD115-7-201ENST00000365306 82 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 RNU6-61P-201ENST00000365528 109 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 RNU6-701P-201ENST00000384059 107 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 NDUFS5P1-201ENST00000405668 289 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 RNA5SP239-201ENST00000410218 129 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 EI24P1-201ENST00000416584 867 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 RPL35AP12-201ENST00000425362 338 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 MTCO1P39-201ENST00000426148 480 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC093106.2-201ENST00000428212 385 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 SRIP2-201ENST00000428470 166 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC024082.2-201ENST00000434771 238 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 TBCAP1-201ENST00000436520 327 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AL359073.1-201ENST00000448036 403 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC092436.1-201ENST00000506450 503 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC104806.1-201ENST00000508720 308 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC108078.2-201ENST00000510750 236 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 MTND3P22-201ENST00000510932 243 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 SNORA31.20-201ENST00000517111 133 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC008489.1-201ENST00000524271 483 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC022690.1-201ENST00000526681 550 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 OR5B19P-201ENST00000531766 928 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 FAM60BP-201ENST00000578364 658 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC024619.4-201ENST00000580924 316 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 SNRPGP15-201ENST00000600149 222 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 VN1R85P-201ENST00000601587 426 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC174048.1-201ENST00000603389 144 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC013553.2-201ENST00000604244 589 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC128687.2-201ENST00000609657 566 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 uc_338.32-201ENST00000615087 172 ntBASIC3.71□□□□□ -1.82
CTHRC1Q96CG8 AC010133.1-201ENST00000615809 842 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms