Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AP002826.1-201ENST00000608835 315 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 SDR42E1P2-201ENST00000614861 481 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC110801.1-201ENST00000623590 212 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 AC116096.1-201ENST00000566804 2314 ntBASIC4.44□□□□□ -1.7
CHMP4CQ96CF2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC006989.1-201ENST00000427212 131 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AL591419.1-201ENST00000427423 339 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC079781.2-201ENST00000446424 169 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 VN1R34P-201ENST00000447387 883 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC132479.1-201ENST00000449160 144 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 VN1R17P-201ENST00000472048 1090 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 HSPE1P6-201ENST00000479457 291 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC079382.1-201ENST00000493346 557 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AP002812.1-201ENST00000495378 474 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 RNU1-95P-201ENST00000516357 160 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 RNU1-128P-201ENST00000516704 160 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 IGKV2-23-201ENST00000518729 323 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 FAM92A1P1-201ENST00000528023 890 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 ARL2BPP2-201ENST00000550907 489 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC136619.2-201ENST00000563361 631 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 RPL23AP84-201ENST00000571193 464 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC105224.1-201ENST00000587055 421 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 GLUD1P4-201ENST00000590914 418 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AL606834.2-201ENST00000602954 668 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC010133.1-201ENST00000615809 842 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC124864.2-201ENST00000624736 186 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 RPS4XP5-202ENST00000449995 1334 ntBASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4CQ96CF2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 GABPAP-201ENST00000419271 1356 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 CR848007.1-201ENST00000442354 1699 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 Y_RNA.1-201ENST00000352915 104 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 RNU1-39P-201ENST00000383897 165 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 SNORA5A-201ENST00000384111 134 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL359634.1-202ENST00000404721 284 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 RNU2-36P-201ENST00000410361 191 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 MTND1P4-201ENST00000435196 415 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 SNRPGP6-201ENST00000451124 220 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 MTND2P24-201ENST00000453434 806 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL136097.1-201ENST00000456945 913 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL049830.2-201ENST00000480072 201 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL359273.1-201ENST00000510918 627 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 ZNF519P2-201ENST00000557032 169 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 MIR3690-201ENST00000580266 75 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC098848.2-201ENST00000588023 330 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC024220.1-201ENST00000603675 484 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 SNORA62.6-201ENST00000606322 83 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AC103710.3-201ENST00000608157 948 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 CR381653.2-201ENST00000624041 768 ntBASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4CQ96CF2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.41□□□□□ -1.7
CHMP4CQ96CF2 SDAD1P2-201ENST00000441308 2028 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms