Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC093156.1-201ENST00000440382 670 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 RPF2P2-201ENST00000504693 896 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 FCF1P8-201ENST00000510322 597 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 SNORA31.3-201ENST00000516029 96 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 RPS3AP4-201ENST00000555161 764 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL391261.3-201ENST00000557194 520 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC145350.1-201ENST00000567426 208 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC034102.8-201ENST00000615146 484 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AL603755.1-201ENST00000619504 163 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AP003399.1-201ENST00000637534 361 ntBASIC3.15□□□□□ -1.91
VPS33AQ96AX1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VPS33AQ96AX1 AC092104.1-201ENST00000497346 1441 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RNU4-35P-201ENST00000362588 141 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RNA5SP119-201ENST00000362715 117 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RNY3P13-201ENST00000365542 102 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RPL21P3-201ENST00000395517 478 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AL445189.1-201ENST00000405722 338 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RNU6-920P-201ENST00000410926 92 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 USP9YP13-201ENST00000417797 480 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 ATG3P1-201ENST00000419507 911 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 HMGN2P30-201ENST00000423237 256 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 MED14P1-201ENST00000430517 648 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RPS6P15-201ENST00000431996 751 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 FCF1P1-201ENST00000432690 571 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RPL7P34-201ENST00000433316 712 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC146507.2-201ENST00000460608 476 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RPL37P6-201ENST00000460682 294 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 RPL7P15-201ENST00000461190 712 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AP000797.1-201ENST00000478870 387 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 ACTR3P3-201ENST00000480448 893 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC233702.1-201ENST00000482905 502 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC106038.2-201ENST00000520706 568 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC083760.1-201ENST00000589621 670 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 VN1R85P-201ENST00000601587 426 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 WISP1-OT1-201ENST00000602893 642 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 DUXAP4-201ENST00000603046 613 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AP001981.2-201ENST00000603241 418 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC092354.1-201ENST00000606057 376 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AL391813.2-201ENST00000609113 322 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AL591516.1-201ENST00000611326 274 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC104010.1-201ENST00000616889 150 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AL356321.1-201ENST00000621360 228 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 MIR6810-201ENST00000622701 70 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AP003485.2-201ENST00000623636 610 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AF246928.1-201ENST00000623768 87 ntBASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.14□□□□□ -1.91
VPS33AQ96AX1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AL137003.2-201ENST00000606924 2538 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 RNU5F-7P-201ENST00000363696 115 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AL359837.1-201ENST00000381357 287 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 NDUFS5P1-201ENST00000405668 289 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 SNORA11B-201ENST00000408175 129 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 CYCSP19-201ENST00000411715 316 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 ELOCP14-201ENST00000428070 331 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 ELOCP7-201ENST00000439968 331 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 RBMY2UP-201ENST00000453474 324 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 MTND1P12-201ENST00000455231 147 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms