Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRF1Q92994 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF1Q92994 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRF1Q92994 TPTE2P4-201ENST00000258589 1605 ntBASIC4.86□□□□□ -1.63
BRF1Q92994 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRF1Q92994 MAPK10-253ENST00000641010 4072 ntBASIC4.86□□□□□ -1.63
BRF1Q92994 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF1Q92994 MARK2P15-201ENST00000432204 2186 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.85□□□□□ -1.63
BRF1Q92994 MIR448-201ENST00000362131 111 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 RNU6-1287P-201ENST00000362914 107 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 Y_RNA.202-201ENST00000364083 110 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 Y_RNA.395-201ENST00000383945 109 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 Y_RNA.493-201ENST00000384422 102 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 SNORA70E-201ENST00000384492 135 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 RNU6-1160P-201ENST00000384546 104 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 RNU6-1060P-201ENST00000384664 107 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 RNY4P36-201ENST00000391116 96 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 RNU4-14P-201ENST00000410858 122 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC074085.1-201ENST00000413598 418 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF1Q92994 AC005517.2-201ENST00000424673 553 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 CALM2P2-201ENST00000428512 440 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 HMGB3P11-201ENST00000440127 604 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF1Q92994 AC107399.1-201ENST00000451226 265 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF1Q92994 AC007967.1-201ENST00000455422 1159 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 RN7SL481P-201ENST00000477764 299 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 RN7SL432P-201ENST00000484057 298 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC105137.1-201ENST00000484355 562 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC090096.1-201ENST00000489168 390 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF1Q92994 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 AC090136.1-201ENST00000520009 240 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF1Q92994 CYCSP29-201ENST00000533731 318 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.85□□□□□ -1.63
BRF1Q92994 OR11H5P-201ENST00000554039 926 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AL163153.1-201ENST00000554223 283 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AL161713.1-201ENST00000555538 145 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 MIR4284-201ENST00000578924 81 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 MIR5583-1-201ENST00000580941 59 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 DPPA3P3-201ENST00000603842 430 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AL080274.1-201ENST00000605565 220 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC084781.2-201ENST00000615568 161 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 MIR7151-201ENST00000617477 60 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 MIR6130-201ENST00000619419 109 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
BRF1Q92994 MTCO1P24-201ENST00000515438 1558 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC090229.1-201ENST00000590983 1609 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC026951.1-201ENST00000559530 2459 ntBASIC4.85□□□□□ -1.63
BRF1Q92994 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.85□□□□□ -1.63
BRF1Q92994 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.85□□□□□ -1.63
BRF1Q92994 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF1Q92994 Z82217.1-201ENST00000625157 8149 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF1Q92994 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRF1Q92994 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF1Q92994 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF1Q92994 MIR369-201ENST00000362155 70 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 UBE2V1P2-201ENST00000397758 440 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 MTCYBP4-201ENST00000401524 249 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 RN7SKP158-201ENST00000410453 326 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 RNA5SP306-201ENST00000411087 107 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 RPL21P24-201ENST00000413752 448 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 RAC1P6-201ENST00000423911 575 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AL138785.1-201ENST00000425821 331 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 Z82205.1-201ENST00000428456 297 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AC016712.1-201ENST00000431088 378 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF1Q92994 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF1Q92994 RNU7-143P-201ENST00000516781 65 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 Y_RNA.711-201ENST00000516993 102 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 RNU6-685P-201ENST00000517088 95 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF1Q92994 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF1Q92994 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF1Q92994 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BRF1Q92994 AL139395.1-201ENST00000603662 160 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 CYP2C61P-201ENST00000604072 290 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AC080078.3-201ENST00000605407 463 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AC124303.1-201ENST00000605703 360 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AL627309.6-201ENST00000606857 840 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 TUG1_2.1-201ENST00000614234 87 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AL445567.2-201ENST00000618935 498 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.84□□□□□ -1.63
BRF1Q92994 AL359757.2-201ENST00000624309 274 ntBASIC4.84□□□□□ -1.63
BRF1Q92994 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRF1Q92994 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF1Q92994 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms