Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AC006600.1-201ENST00000572529 153 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 FAM27B-201ENST00000610601 213 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AL359547.2-201ENST00000615810 418 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 AC009643.2-201ENST00000603543 1448 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
TRIM41Q8WV44 MAPK10-328ENST00000641553 4009 ntBASIC8.18□□□□□ -1.1
TRIM41Q8WV44 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 MARK2P15-201ENST00000432204 2186 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC008669.1-201ENST00000565823 2178 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 RNU6-212P-201ENST00000362642 104 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 Y_RNA.462-201ENST00000384268 102 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 SNORA51.11-201ENST00000384442 131 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 MIR517A-201ENST00000385001 87 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 RAC1P3-201ENST00000416129 580 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 RPL23AP38-201ENST00000423801 469 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC007389.2-201ENST00000434630 306 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AP000936.3-201ENST00000438127 255 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AL121871.1-201ENST00000443413 436 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 RN7SL303P-201ENST00000469773 251 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC007991.1-201ENST00000522680 631 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC018442.3-201ENST00000523025 183 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC068446.3-201ENST00000555285 382 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC006349.1-201ENST00000555526 235 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 MIR4660-201ENST00000583549 74 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC012433.1-201ENST00000588916 398 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AL451044.1-201ENST00000604867 238 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 FTX_2.1-201ENST00000618816 94 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 AC012314.7-201ENST00000619693 93 ntBASIC8.17□□□□□ -1.1
TRIM41Q8WV44 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TRIM41Q8WV44 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 MIR372-201ENST00000362225 67 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RNU1-130P-201ENST00000363930 160 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RNU6-1243P-201ENST00000364028 107 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RNU6-1156P-201ENST00000410365 100 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AC108032.1-201ENST00000416706 207 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AL031736.2-201ENST00000426573 787 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RPL35AP22-201ENST00000436855 335 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RNU7-187P-201ENST00000458985 68 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 TRBVB-201ENST00000477100 408 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RPL21P6-201ENST00000479171 504 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AP000926.1-201ENST00000479573 241 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AC011005.2-201ENST00000487324 359 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 RNU4ATAC10P-201ENST00000516967 122 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 SLC2A3P1-201ENST00000519666 1451 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AL121932.1-201ENST00000605542 214 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AC084757.4-201ENST00000616350 526 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 AL445437.1-201ENST00000623157 3087 ntBASIC8.16□□□□□ -1.1
TRIM41Q8WV44 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
TRIM41Q8WV44 OR56B2P-202ENST00000641377 2453 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 Y_RNA.151-201ENST00000363566 112 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 RNU4-42P-201ENST00000364738 142 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 Y_RNA.551-201ENST00000384661 102 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 RPS5P7-201ENST00000456664 608 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 RNU7-169P-201ENST00000459456 61 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC8.15□□□□□ -1.1
TRIM41Q8WV44 RPL17P19-201ENST00000489069 552 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 RN7SL558P-201ENST00000497468 299 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 RPL23AP53-201ENST00000521854 457 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 CYCSP27-201ENST00000527643 293 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 AL713866.2-201ENST00000603579 219 ntBASIC8.15□□□□□ -1.1
TRIM41Q8WV44 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms