Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 DEFB108F-201ENST00000344638 222 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 RNU6-76P-201ENST00000384060 104 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 RNU6-1207P-201ENST00000384343 107 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 RPS4XP3-201ENST00000398541 413 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 RNU6-584P-201ENST00000410350 95 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 RNA5SP344-201ENST00000411081 104 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 CCDC58P2-201ENST00000417131 366 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC093151.1-201ENST00000427711 313 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 FCF1P1-201ENST00000432690 571 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC244505.4-201ENST00000434905 287 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 SETP8-201ENST00000435341 628 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 NDUFB4P6-201ENST00000436819 366 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AL121871.1-201ENST00000443413 436 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 SSXP5-201ENST00000443473 287 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 RPL36AP33-201ENST00000450395 310 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 CACYBPP2-201ENST00000453625 678 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC234775.1-201ENST00000454247 670 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 SNORD121B-201ENST00000458838 81 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 RPL7P18-201ENST00000478965 734 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC103975.1-201ENST00000482506 483 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC091951.3-201ENST00000504093 246 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 DEFB108D-201ENST00000527787 222 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 BNIP3P40-201ENST00000596017 556 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC011451.2-201ENST00000604303 598 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 HSPE1P7-201ENST00000604681 321 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AL158211.4-201ENST00000606988 584 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC006213.4-201ENST00000616184 634 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC022960.3-201ENST00000619794 441 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AP000484.1-201ENST00000620067 1252 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC008443.7-201ENST00000622195 246 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AL391262.2-201ENST00000622466 494 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 CR381653.2-201ENST00000624041 768 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 LRRC77P-213ENST00000637727 880 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 DDX43P2-201ENST00000604753 1354 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 FAM35CP-201ENST00000554755 2470 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LINC01560Q8TB33 AC011460.1-201ENST00000636268 1834 ntBASIC2.17□□□□□ -2.06
LINC01560Q8TB33 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AL354719.1-201ENST00000406535 843 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 FAT1P1-201ENST00000406588 507 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 HSPE1P1-201ENST00000421494 318 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 MTND3P1-201ENST00000441336 220 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC104389.3-201ENST00000445629 235 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AL592447.1-201ENST00000447592 540 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AL590664.1-201ENST00000448065 339 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC093392.2-201ENST00000450682 337 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 USP9YP10-201ENST00000454868 628 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 FAM172BP-201ENST00000487497 1089 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 RPS29P21-201ENST00000496272 170 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 SNORA31.1-201ENST00000515993 133 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 SNORA31.5-201ENST00000516190 133 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 CASP1P1-201ENST00000526345 212 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC004987.4-201ENST00000603383 338 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AL450336.1-201ENST00000605180 586 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AL158042.1-201ENST00000605338 460 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC092106.3-201ENST00000611308 722 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 MIR6076-201ENST00000617521 113 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 MIR6130-201ENST00000619419 109 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 MIR7843-201ENST00000622274 79 ntBASIC2.16□□□□□ -2.06
LINC01560Q8TB33 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
LINC01560Q8TB33 AC006020.1-201ENST00000420179 1854 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms