Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LSM6P2-201ENST00000552208 177 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL049838.1-201ENST00000563647 981 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC023824.3-201ENST00000569003 562 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 SNORD14A-201ENST00000606526 91 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC004852.3-201ENST00000614131 326 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL590099.1-201ENST00000615276 138 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AL136981.2-201ENST00000617319 734 ntBASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CCDC112Q8NEF3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CCDC112Q8NEF3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 RNU6-1155P-201ENST00000363554 107 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 SNORA3A-201ENST00000364113 130 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 RNU6-619P-201ENST00000365146 108 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AL355497.1-201ENST00000406262 551 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 BX276092.3-201ENST00000424182 230 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 ZYG11AP1-201ENST00000430329 837 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 GTF2IP20-201ENST00000431663 360 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 ZFAND6P1-201ENST00000434138 605 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AL691517.1-201ENST00000440833 1235 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 RAC1P7-201ENST00000445367 377 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 RPL30P5-201ENST00000494923 336 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 HMGN1P28-201ENST00000521340 364 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 OR5AQ1P-201ENST00000527596 927 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC023824.2-201ENST00000566185 400 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 BPTFP1-201ENST00000579209 492 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC009090.3-201ENST00000616553 565 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC012640.5-201ENST00000623897 319 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 ZNF663P-202ENST00000641770 1131 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 MTND4P35-201ENST00000604257 1375 ntBASIC2.21□□□□□ -2.06
CCDC112Q8NEF3 AC092881.1-201ENST00000638218 2733 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AC022336.2-201ENST00000568966 2538 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AC002543.1-201ENST00000299783 1954 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 RNU6-882P-201ENST00000391025 103 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 FGF7P5-201ENST00000441829 291 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AL049714.1-201ENST00000466686 347 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AL138976.2-201ENST00000563989 694 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 DEFB122-202ENST00000569013 197 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AC040174.2-201ENST00000602701 465 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AC097504.2-201ENST00000608088 454 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AC104307.1-201ENST00000616142 196 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 MIR7515-201ENST00000637837 67 ntBASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC112Q8NEF3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 RPS3AP24-201ENST00000407896 734 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AL023807.1-201ENST00000407932 359 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 RNU4-26P-201ENST00000410270 107 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC104164.3-201ENST00000467363 1258 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 MTND4LP3-201ENST00000468320 276 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 RPL9P6-201ENST00000492764 598 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC006390.1-201ENST00000508068 283 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 ZNF705CP-201ENST00000530515 889 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 YWHAZP1-201ENST00000556286 722 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 MTATP6P25-201ENST00000574491 261 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC133794.1-201ENST00000602731 914 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 AC012493.3-201ENST00000604494 112 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.19□□□□□ -2.06
CCDC112Q8NEF3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 SGO1P1-201ENST00000603525 1447 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 AL137003.2-201ENST00000606924 2538 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 OR5T3-201ENST00000303059 1023 ntBASIC2.18□□□□□ -2.06
CCDC112Q8NEF3 FAM133CP-201ENST00000332869 704 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms