Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 CKAP2P1-201ENST00000555477 2049 ntBASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SMC1BQ8NDV3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SMC1BQ8NDV3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.65□□□□□ -1.66
SMC1BQ8NDV3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SMC1BQ8NDV3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SMC1BQ8NDV3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SMC1BQ8NDV3 RNU6-511P-201ENST00000363496 107 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RNU1-33P-201ENST00000364249 162 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RHOT1P2-201ENST00000366423 333 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RNU6-74P-201ENST00000384235 107 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RNU6-39P-201ENST00000384344 107 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC068050.1-201ENST00000394891 380 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RAP1BP3-201ENST00000407180 549 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 UBE2FP1-201ENST00000416536 447 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 MED13P1-201ENST00000428342 171 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL606489.2-201ENST00000433886 234 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC005094.1-201ENST00000440420 368 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC006480.1-201ENST00000449887 378 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RNU7-63P-201ENST00000459054 62 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RPL21P10-201ENST00000463521 490 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 RPS15AP36-201ENST00000492022 382 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 PPBPP1-201ENST00000510807 373 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 FAM60DP-201ENST00000524174 632 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC055876.1-202ENST00000567053 138 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC012417.1-201ENST00000582307 1039 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC060780.3-201ENST00000589464 80 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL139395.1-201ENST00000603662 160 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC025253.1-201ENST00000613623 543 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC092794.2-201ENST00000620933 563 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 YWHAEP7-203ENST00000622054 312 ntBASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.65□□□□□ -1.67
SMC1BQ8NDV3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC007390.2-201ENST00000606229 3803 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 ZNF962P-201ENST00000443465 3140 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 RNA5SP52-201ENST00000362448 134 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 Y_RNA.38-201ENST00000362617 102 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 SNORA72.1-201ENST00000363485 129 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 RNU6-606P-201ENST00000384721 111 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AL136372.1-201ENST00000403060 228 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AL583834.1-201ENST00000406943 343 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 RNU6-908P-201ENST00000410160 94 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC138393.2-201ENST00000414742 246 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 RAC1P3-201ENST00000416129 580 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC099677.1-201ENST00000420575 175 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 MTND5P20-201ENST00000448677 143 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC008155.2-201ENST00000464337 397 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC025518.1-201ENST00000479856 347 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC139783.2-201ENST00000504847 1145 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC025465.4-201ENST00000513422 638 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AL034351.1-201ENST00000605288 668 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.64□□□□□ -1.67
SMC1BQ8NDV3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SMC1BQ8NDV3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMC1BQ8NDV3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms