Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR9-1-201ENST00000385198 89 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 VN1R51P-201ENST00000411675 945 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 NDUFB4P7-201ENST00000423198 363 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 MTCO2P23-201ENST00000425216 680 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC009237.8-201ENST00000445492 379 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AL009048.1-201ENST00000450437 298 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 OR4R1P-201ENST00000529879 463 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC068135.2-201ENST00000569293 1028 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 MYL12BP1-201ENST00000569826 507 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 MIR4509-3-201ENST00000578671 94 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 MIR4509-2-201ENST00000583920 94 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AL353997.4-201ENST00000586196 166 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 U73023.1-201ENST00000603134 700 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AL391834.2-201ENST00000609982 546 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 MIR4509-1-201ENST00000618224 94 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC109809.1-201ENST00000619665 545 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC006386.2-201ENST00000624491 75 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC012005.1-201ENST00000624575 75 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 AC026241.1-201ENST00000517873 2142 ntBASIC2.68□□□□□ -1.98
CCDC50Q8IVM0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 RNU6-1078P-201ENST00000364522 103 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AL356421.1-201ENST00000403255 413 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 USP9YP33-201ENST00000412220 421 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 RPL7P37-201ENST00000425095 738 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC234781.2-201ENST00000426370 994 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 USP9YP35-201ENST00000435696 412 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 MTCO2P20-201ENST00000437339 673 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AL031313.1-201ENST00000448435 256 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 snoU13.22-201ENST00000459428 104 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC109445.1-201ENST00000512356 383 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC090888.1-201ENST00000561335 1141 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC008739.2-201ENST00000597006 317 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC080013.3-201ENST00000606839 578 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC245297.2-201ENST00000610119 565 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 AC099654.7-201ENST00000635788 2127 ntBASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC50Q8IVM0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC087359.1-201ENST00000508335 1740 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AL161781.1-201ENST00000354277 403 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 U8.8-201ENST00000365399 135 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 RNU6-744P-201ENST00000365557 107 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 RNU6-1316P-201ENST00000384242 108 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 RNU6-198P-201ENST00000384258 104 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AL162578.1-201ENST00000406202 378 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AF274854.1-201ENST00000413236 615 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC080125.1-201ENST00000414888 684 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 MTCYBP38-201ENST00000417160 1123 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC092648.1-201ENST00000425870 423 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC091390.3-201ENST00000426478 338 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC008850.1-201ENST00000427546 362 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 USP9YP25-201ENST00000457708 443 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC096725.1-201ENST00000514266 313 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC087241.2-201ENST00000535801 324 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC140725.3-201ENST00000616193 880 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AL109620.1-201ENST00000618738 1197 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC022306.3-201ENST00000619930 550 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 AC110079.1-202ENST00000635213 138 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 TPTE2P4-201ENST00000258589 1605 ntBASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CCDC50Q8IVM0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms