Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 MIR148B-201ENST00000362252 99 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 RNU1-70P-201ENST00000362618 164 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 RNU6-1035P-201ENST00000384477 107 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 Y_RNA.560-201ENST00000384689 102 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AC078974.1-201ENST00000411597 223 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 DDX3P2-201ENST00000446138 111 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 ZNF114P1-201ENST00000453500 292 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 RPS20P22-201ENST00000473700 357 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 PHBP14-201ENST00000512887 367 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 MRPS33P3-201ENST00000513456 322 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 RNU6-64P-201ENST00000517119 105 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 RNU6-232P-201ENST00000517144 64 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AC007115.1-201ENST00000546853 234 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 TRAV28-201ENST00000557548 323 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AL356432.3-201ENST00000568952 465 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 CKS1BP3-201ENST00000600888 237 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AL162713.1-201ENST00000604480 262 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AL355472.4-201ENST00000610233 626 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AC004696.1-201ENST00000614345 607 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 SNHG22-203ENST00000617833 660 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AL136313.1-201ENST00000624804 202 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AL445523.1-201ENST00000451184 1362 ntBASIC3.37□□□□□ -1.87
PRPF39Q86UA1 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 SRP72P2-201ENST00000344851 1979 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 RNU6-198P-201ENST00000384258 104 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AL365184.2-201ENST00000431139 435 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 UBE2D3P1-201ENST00000436669 444 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 GDI2P2-201ENST00000445131 608 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 RPL37P6-201ENST00000460682 294 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 RPS29P2-201ENST00000479278 136 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AL135752.1-201ENST00000479477 471 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 MTND5P13-201ENST00000513046 1079 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AC012493.2-201ENST00000595083 291 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AP000403.1-201ENST00000603349 851 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 NUTF2P8-201ENST00000604593 363 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AC008277.2-201ENST00000605196 797 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 Z99289.3-201ENST00000605586 594 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 AF246928.1-201ENST00000623768 87 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 ZNF826P-207ENST00000622273 1910 ntBASIC3.36□□□□□ -1.87
PRPF39Q86UA1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF39Q86UA1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 PABPC1P9-201ENST00000426076 1612 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 RNU5F-6P-201ENST00000362979 116 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 RNU6-799P-201ENST00000363567 107 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 RPS20P2-201ENST00000402520 389 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 MTCYBP36-201ENST00000404146 440 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 ELOCP17-201ENST00000414751 326 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 ARPC3P1-201ENST00000437218 533 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AL512286.1-201ENST00000439244 400 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AL049734.2-201ENST00000441066 616 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 BMI1P1-201ENST00000445879 941 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AL133217.1-201ENST00000450980 425 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 SETP11-201ENST00000473027 690 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 RPL30P6-201ENST00000475925 342 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC114797.1-201ENST00000514003 728 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 RNU6-1003P-201ENST00000517099 105 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AL845331.3-202ENST00000562856 261 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC015917.1-201ENST00000579654 510 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC121334.2-201ENST00000605387 271 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC245517.5-201ENST00000611529 162 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms