Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC090578.1-201ENST00000604955 591 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC121334.2-201ENST00000605387 271 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC087241.4-201ENST00000612441 480 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC011460.1-201ENST00000636268 1834 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AL136964.1-201ENST00000622038 2990 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 MIR22-201ENST00000362190 85 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 RNU4-82P-201ENST00000362443 140 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 RNU5A-6P-201ENST00000384136 116 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-1215P-201ENST00000384441 102 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-114P-201ENST00000384704 105 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 SNORD67-201ENST00000390833 111 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AL445529.1-201ENST00000398713 389 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AL138878.1-201ENST00000405131 347 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 CCNG1P1-201ENST00000406783 885 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC078974.1-201ENST00000411597 223 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AF274854.1-201ENST00000413236 615 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 MTND6P13-201ENST00000443510 523 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 SNORD108-201ENST00000459332 71 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 MTND2P33-201ENST00000506452 1031 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AP003497.1-201ENST00000528472 562 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AL121576.1-201ENST00000556055 276 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 HMGB1P6-201ENST00000569046 646 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC099489.2-201ENST00000574976 260 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 HMGN1P30-201ENST00000589286 268 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC068790.3-201ENST00000602988 553 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AL365503.1-201ENST00000605247 905 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 HMGN2P28-201ENST00000606102 262 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC091834.1-201ENST00000614543 472 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AC009159.1-201ENST00000618386 642 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 MTND5P33-201ENST00000571250 1450 ntBASIC4.24□□□□□ -1.73
KRT28Q7Z3Y7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AL359693.1-201ENST00000614959 2407 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 MTCO1P9-201ENST00000505577 1534 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 Y_RNA.3-201ENST00000362331 103 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 RPS3AP36-201ENST00000398190 775 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 C1DP2-201ENST00000418167 426 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AL353777.1-201ENST00000425552 326 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC104651.1-201ENST00000427559 735 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC010975.2-201ENST00000427781 588 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 FTH1P6-201ENST00000430768 320 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 RABEPKP1-201ENST00000440529 1026 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 PGBD4P3-201ENST00000440731 581 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 MTCO3P20-201ENST00000454926 688 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 SNORD121B-201ENST00000458838 81 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 RPL23AP41-201ENST00000484754 458 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC096751.1-202ENST00000502691 1067 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC123904.2-201ENST00000548059 300 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 MIR3913-1-201ENST00000577744 102 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 VN1R79P-201ENST00000593540 513 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC004492.1-201ENST00000607036 742 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC072046.2-201ENST00000618366 268 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC002550.2-201ENST00000621246 394 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC068792.1-201ENST00000621354 417 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AL356585.4-201ENST00000623078 1229 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC099654.13-201ENST00000639774 207 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 AC027514.1-201ENST00000588561 1603 ntBASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
KRT28Q7Z3Y7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 FARSBP1-201ENST00000435808 1778 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 AC244517.1-201ENST00000606030 2086 ntBASIC4.22□□□□□ -1.73
KRT28Q7Z3Y7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms