Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 FAM92A1P2-202ENST00000504766 877 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 AL512310.1-201ENST00000548639 172 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AL157687.1-201ENST00000554853 619 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC025884.1-201ENST00000556034 378 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC025678.1-201ENST00000567861 338 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 SNORA59B-202ENST00000578183 701 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 SNORA62.6-201ENST00000606322 83 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC110801.1-201ENST00000623590 212 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 AC005609.4-201ENST00000625071 447 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.34□□□□□ -1.87
SHFQ7M4L6 MIR4275-201ENST00000636486 87 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
SHFQ7M4L6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHFQ7M4L6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SHFQ7M4L6 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.88
SHFQ7M4L6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.34□□□□□ -1.88
SHFQ7M4L6 AC092326.2-201ENST00000624772 1561 ntBASIC3.34□□□□□ -1.88
SHFQ7M4L6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHFQ7M4L6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHFQ7M4L6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHFQ7M4L6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHFQ7M4L6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHFQ7M4L6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHFQ7M4L6 RNU6-173P-201ENST00000364215 104 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RNU6-483P-201ENST00000384088 108 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RNA5SP424-201ENST00000390988 115 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RNU6-1158P-201ENST00000391167 107 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 SOD2P1-201ENST00000396543 562 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 MIR1277-201ENST00000408536 78 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 MTATP6P16-201ENST00000434543 526 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RPL7P54-201ENST00000438336 674 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC122718.1-201ENST00000439448 744 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 MRPS31P2-201ENST00000451581 518 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC022364.2-201ENST00000457963 554 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 snoU13.4-201ENST00000458916 104 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 FAM133DP-201ENST00000464802 691 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RPL7P19-201ENST00000469948 618 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 VN1R104P-201ENST00000505115 1009 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC026427.2-201ENST00000506228 536 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC005921.1-201ENST00000510589 286 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 SNORD27.1-201ENST00000516319 72 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RNU6-1092P-201ENST00000516955 87 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 RN7SKP60-201ENST00000516985 239 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AP001646.1-201ENST00000527936 915 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 OR4R1P-201ENST00000529879 463 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC120057.2-201ENST00000571520 271 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 MIR4443-201ENST00000585052 53 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC006504.3-201ENST00000586818 523 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 AP001330.4-201ENST00000604350 154 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC007621.1-201ENST00000604544 437 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AL109618.2-201ENST00000605527 211 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC093788.1-201ENST00000609356 927 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AL355810.1-201ENST00000614629 552 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 MIR6500-201ENST00000622700 86 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 AC093648.1-201ENST00000623546 606 ntBASIC3.33□□□□□ -1.88
SHFQ7M4L6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHFQ7M4L6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.32□□□□□ -1.88
SHFQ7M4L6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHFQ7M4L6 USP8P1-201ENST00000494673 3183 ntBASIC3.32□□□□□ -1.88
SHFQ7M4L6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms