Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 MTND1P18-201ENST00000448191 573 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 HMGB3P3-201ENST00000510526 400 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AL359273.1-201ENST00000510918 627 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 LDHBP3-201ENST00000514909 822 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AL390240.1-201ENST00000612950 384 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 U3.40-201ENST00000408706 208 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AL590233.1-201ENST00000430017 456 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 SNRPEP4-201ENST00000435815 279 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 DUXAP5-201ENST00000529668 529 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AC245036.5-201ENST00000596330 847 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR3Q6ZT12 CUL4AP1-201ENST00000514750 1863 ntBASIC1.54□□□□□ -2.16
UBR3Q6ZT12 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.53□□□□□ -2.16
UBR3Q6ZT12 AL513321.1-201ENST00000441175 761 ntBASIC1.53□□□□□ -2.16
UBR3Q6ZT12 AL136380.1-201ENST00000447970 162 ntBASIC1.53□□□□□ -2.16
UBR3Q6ZT12 AC005297.2-201ENST00000450430 606 ntBASIC1.53□□□□□ -2.16
UBR3Q6ZT12 AC069277.2-201ENST00000454211 432 ntBASIC1.53□□□□□ -2.16
UBR3Q6ZT12 NF1P3-201ENST00000457709 450 ntBASIC1.53□□□□□ -2.16
UBR3Q6ZT12 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.53□□□□□ -2.16
UBR3Q6ZT12 GLUD1P4-201ENST00000590914 418 ntBASIC1.53□□□□□ -2.16
UBR3Q6ZT12 AP003072.4-201ENST00000624580 310 ntBASIC1.53□□□□□ -2.16
UBR3Q6ZT12 RNU4-91P-201ENST00000364778 135 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AC016727.2-201ENST00000603988 621 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AC099654.7-201ENST00000635788 2127 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 MIR17-201ENST00000385012 84 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AC096632.1-201ENST00000427395 310 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 RPL37P6-202ENST00000464216 403 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 AC090897.2-201ENST00000581715 130 ntBASIC1.52□□□□□ -2.17
UBR3Q6ZT12 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UBR3Q6ZT12 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 RNU1-52P-201ENST00000384190 164 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 RPL23AP33-201ENST00000442301 452 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 RNU6-405P-201ENST00000516637 110 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 RNU6-467P-201ENST00000517027 110 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 HMGB1P46-201ENST00000520062 610 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.51□□□□□ -2.17
UBR3Q6ZT12 AC007342.9-201ENST00000623877 1385 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 MTND5P10-201ENST00000603719 1809 ntBASIC1.51□□□□□ -2.17
UBR3Q6ZT12 ZNF519P1-201ENST00000449011 1626 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 RNU1-133P-201ENST00000364867 167 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 MTND5P25-201ENST00000430499 799 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 UBE2FP3-201ENST00000436366 524 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 IPO7P1-201ENST00000442031 636 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 SNRPFP3-201ENST00000457792 225 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 MTND3P6-201ENST00000485242 339 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC093767.1-201ENST00000504523 156 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AP001350.1-201ENST00000601906 1524 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 MTCO1P4-201ENST00000520516 1409 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 MIR524-201ENST00000385242 87 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC244098.2-201ENST00000422068 99 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC093801.2-201ENST00000503966 1050 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.5□□□□□ -2.17
UBR3Q6ZT12 CENPUP2-201ENST00000555897 1186 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 MIR7973-1-201ENST00000614683 76 ntBASIC1.5□□□□□ -2.17
UBR3Q6ZT12 AC079597.1-201ENST00000624306 508 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms