Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 MTCO2P4-201ENST00000517968 247 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC109635.4-202ENST00000531666 412 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 COX6CP3-201ENST00000580869 223 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 NRBF2P1-201ENST00000587407 859 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC103710.1-201ENST00000610003 901 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL590282.1-201ENST00000610379 1136 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL159972.1-201ENST00000625150 448 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 MTND5P29-201ENST00000458676 1807 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AL079305.1-201ENST00000623159 3008 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC009812.4-201ENST00000569134 1805 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 MIR23B-201ENST00000384832 97 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 MIR183-201ENST00000384958 110 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RNA5SP171-201ENST00000391071 115 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RPL23AP32-201ENST00000395315 459 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RNA5SP107-201ENST00000411358 122 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 HMGN1P24-201ENST00000412282 298 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 SPA17P1-201ENST00000416656 452 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 SSXP9-201ENST00000417503 292 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 YME1L1P1-201ENST00000429435 297 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 CST9LP2-201ENST00000437612 320 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 PRDX3P3-201ENST00000447765 522 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 PRSS3P4-201ENST00000453323 162 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RNU7-59P-201ENST00000459101 61 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC011825.1-201ENST00000484967 388 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-720P-201ENST00000516363 108 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 SNORA18.6-201ENST00000516792 115 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AP000857.1-201ENST00000532151 543 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC004024.1-201ENST00000549244 247 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 DUXAP4-201ENST00000603046 613 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC091805.2-201ENST00000603848 235 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC121334.2-201ENST00000605387 271 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AL157817.1-201ENST00000614264 790 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 AC015540.1-201ENST00000615828 501 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 U6.105-201ENST00000637379 88 ntBASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNE3Q6ZMZ3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 Y_RNA.582-201ENST00000391023 95 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RNA5SP31-201ENST00000411144 127 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-516P-201ENST00000411381 104 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 MTND3P17-201ENST00000416968 344 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 MTATP6P4-201ENST00000427725 675 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RPL21P112-201ENST00000434403 463 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AL121871.1-201ENST00000443413 436 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC026801.2-201ENST00000515352 425 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RN7SKP298-201ENST00000515950 94 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-798P-201ENST00000516912 103 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-430P-201ENST00000517078 107 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AP003072.2-201ENST00000527756 676 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC005476.1-201ENST00000554427 397 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms