Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Y_RNA.720-201ENST00000517166 92 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AC093012.1-202ENST00000549403 582 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AL157817.1-201ENST00000614264 790 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AL589994.2-201ENST00000621124 579 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AC039056.2-201ENST00000622261 511 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AL445363.3-201ENST00000623080 671 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AC139769.1-204ENST00000472297 1931 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RLIMP1-201ENST00000339626 1680 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-1309P-201ENST00000363305 108 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-1284P-201ENST00000363701 100 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC117470.1-201ENST00000381974 330 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RNU1-63P-201ENST00000383902 164 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 CISD1P1-201ENST00000393907 327 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 SOD2P1-201ENST00000396543 562 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RNU4-65P-201ENST00000410473 140 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RAC1P6-201ENST00000423911 575 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 COX6B1P7-201ENST00000430845 235 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RPL23AP89-201ENST00000439324 255 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 SCARNA18-201ENST00000459004 134 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 TRBV1-201ENST00000476502 284 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RNA5SP497-201ENST00000516081 97 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RNA5SP519-201ENST00000516480 119 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 IGKV2D-36-201ENST00000518643 226 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC135001.1-201ENST00000544546 283 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 CR383656.7-201ENST00000548164 174 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 OR11H5P-201ENST00000554039 926 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL670379.6-201ENST00000603753 252 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL670379.11-201ENST00000604059 253 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC008162.1-201ENST00000604718 254 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL670379.1-201ENST00000604752 252 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL670379.5-201ENST00000605253 252 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL670379.12-201ENST00000605291 253 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL670379.8-201ENST00000605353 252 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AL670379.7-201ENST00000605823 252 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC091905.2-201ENST00000623143 306 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC067931.1-201ENST00000624190 671 ntBASIC5.4□□□□□ -1.54
PRPF40BQ6NWY9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 AC006971.1-201ENST00000407916 4486 ntBASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.4□□□□□ -1.55
PRPF40BQ6NWY9 MTND5P19-201ENST00000424872 1794 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC011155.1-201ENST00000316512 456 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 RNU1-20P-201ENST00000363314 162 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 Y_RNA.482-201ENST00000384377 111 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 MIR1250-201ENST00000408098 113 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC007389.2-201ENST00000434630 306 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 FABP5P13-201ENST00000452144 328 ntBASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40BQ6NWY9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms