Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC012360.2-201ENST00000609349 391 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC025048.6-202ENST00000627667 438 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC000403.1-201ENST00000613696 3585 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC091152.2-201ENST00000591628 2569 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC092326.2-201ENST00000624772 1561 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 HSPA8P1-201ENST00000425843 1833 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 MTND4P4-201ENST00000439033 1366 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 RNU5E-8P-201ENST00000363502 116 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 Y_RNA.359-201ENST00000365498 102 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 RNU6-76P-201ENST00000384060 104 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 RNY3P10-201ENST00000384764 102 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 CCNG1P1-201ENST00000406783 885 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 U3.42-201ENST00000408746 214 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC006366.1-201ENST00000422002 759 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL356583.2-201ENST00000426536 280 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 SKP1P1-201ENST00000438081 489 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL031667.1-201ENST00000440222 725 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 RPL26P6-201ENST00000440913 438 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 COX6CP2-201ENST00000444980 225 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL592447.1-201ENST00000447592 540 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC004924.1-201ENST00000480160 781 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 HMGN1P28-201ENST00000521340 364 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 ERHP1-201ENST00000523006 310 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC022690.1-201ENST00000526681 550 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 MTND4LP18-201ENST00000526864 291 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL133271.1-201ENST00000538229 291 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC135279.1-201ENST00000543493 504 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 MIR4672-201ENST00000583126 81 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 TPMTP1-201ENST00000592307 737 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL034351.1-201ENST00000605288 668 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC004067.1-201ENST00000608733 700 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC068831.7-201ENST00000616954 363 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC099506.2-201ENST00000623074 221 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC112204.3-201ENST00000623822 332 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC139792.2-201ENST00000624218 587 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC068137.4-201ENST00000638485 296 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AL136164.4-201ENST00000625013 2135 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 AC005832.2-201ENST00000538921 1430 ntBASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LYSMD4Q5XG99 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 OR1S2-201ENST00000302592 978 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 RPL7P26-201ENST00000333817 754 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 DEFB108F-201ENST00000344638 222 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 SNORA71.1-201ENST00000364523 117 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 RNU5E-5P-201ENST00000365379 116 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AL031121.1-201ENST00000406553 254 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 RHEBP3-201ENST00000411920 351 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 MTCO2P34-201ENST00000421994 607 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 PPP1R11P2-201ENST00000423543 382 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AC233728.2-201ENST00000425348 757 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AC022018.1-201ENST00000430685 241 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 HMGN2P20-201ENST00000437531 273 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AL022238.1-201ENST00000442557 355 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 TPT1P14-201ENST00000448018 505 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 KC877373.1-201ENST00000479066 408 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 RN7SL429P-201ENST00000479090 223 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 RN7SL489P-201ENST00000486185 223 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 RN7SL327P-201ENST00000488659 223 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 AC109464.2-201ENST00000510242 943 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 SNORA31.22-201ENST00000517204 135 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 DEFB108D-201ENST00000527787 222 ntBASIC3.16□□□□□ -1.9
LYSMD4Q5XG99 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms