Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 HMGN2P16-201ENST00000456802 261 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC022493.1-201ENST00000492984 337 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC087854.1-201ENST00000519706 414 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AP005435.4-201ENST00000529514 284 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 OR4R1P-201ENST00000529879 463 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC096586.2-201ENST00000610260 441 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC022079.2-201ENST00000619739 566 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC068700.1-201ENST00000565862 3754 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC135776.4-201ENST00000624300 1904 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 RNU6-882P-201ENST00000391025 103 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AL033519.2-201ENST00000403958 392 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AL030996.1-201ENST00000411430 235 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AL445183.3-201ENST00000414168 502 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 SNRPFP3-201ENST00000457792 225 ntBASIC1.74□□□□□ -2.13
NUP188Q5SRE5 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.74□□□□□ -2.13
NUP188Q5SRE5 DDX43P2-201ENST00000604753 1354 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AL022400.1-201ENST00000423946 935 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 MTCO1P48-201ENST00000448024 1096 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP188Q5SRE5 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NUP188Q5SRE5 NPM1P52-201ENST00000518264 846 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AC087808.1-201ENST00000520501 361 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AP000907.2-201ENST00000530827 353 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AC006065.5-201ENST00000623427 349 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AP003072.4-201ENST00000624580 310 ntBASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.73□□□□□ -2.13
NUP188Q5SRE5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.72□□□□□ -2.13
NUP188Q5SRE5 AL161722.3-201ENST00000605789 2983 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 RNU6-1331P-201ENST00000363658 106 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 SNORA51.2-201ENST00000364595 132 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 RNU1-52P-201ENST00000384190 164 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 RNY1P4-201ENST00000384595 115 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 FABP5P3-201ENST00000437960 408 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.72□□□□□ -2.13
NUP188Q5SRE5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.72□□□□□ -2.13
NUP188Q5SRE5 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.72□□□□□ -2.13
NUP188Q5SRE5 AC006499.2-201ENST00000513470 337 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 RNA5SP468-201ENST00000516782 93 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 DUXAP5-201ENST00000529668 529 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 RNF6P1-201ENST00000444889 1784 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NUP188Q5SRE5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.72□□□□□ -2.13
NUP188Q5SRE5 AC138915.1-201ENST00000565427 1685 ntBASIC1.72□□□□□ -2.13
NUP188Q5SRE5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
NUP188Q5SRE5 RNU6-600P-201ENST00000362524 99 ntBASIC1.71□□□□□ -2.13
NUP188Q5SRE5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.13
NUP188Q5SRE5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.71□□□□□ -2.13
NUP188Q5SRE5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.71□□□□□ -2.13
NUP188Q5SRE5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.71□□□□□ -2.13
NUP188Q5SRE5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.71□□□□□ -2.13
NUP188Q5SRE5 ARL2BPP4-201ENST00000506854 471 ntBASIC1.71□□□□□ -2.13
NUP188Q5SRE5 RN7SKP265-201ENST00000516448 223 ntBASIC1.71□□□□□ -2.13
NUP188Q5SRE5 AC068338.1-201ENST00000565567 176 ntBASIC1.71□□□□□ -2.13
NUP188Q5SRE5 MIR5000-201ENST00000577717 103 ntBASIC1.71□□□□□ -2.13
NUP188Q5SRE5 AC245128.3-201ENST00000594721 748 ntBASIC1.71□□□□□ -2.13
NUP188Q5SRE5 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NUP188Q5SRE5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.71□□□□□ -2.14
NUP188Q5SRE5 AL583843.1-201ENST00000456070 346 ntBASIC1.71□□□□□ -2.14
NUP188Q5SRE5 AC010301.1-201ENST00000473936 355 ntBASIC1.71□□□□□ -2.14
NUP188Q5SRE5 AC087373.1-201ENST00000524920 491 ntBASIC1.71□□□□□ -2.14
NUP188Q5SRE5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.71□□□□□ -2.14
NUP188Q5SRE5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NUP188Q5SRE5 AC084364.2-201ENST00000546924 395 ntBASIC1.71□□□□□ -2.14
NUP188Q5SRE5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 CENPCP1-201ENST00000533085 2578 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 RPL35AP22-201ENST00000436855 335 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 SNRPGP13-201ENST00000442212 177 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 AC125611.2-201ENST00000551907 647 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 SUB1P4-201ENST00000566062 339 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 AC019131.2-201ENST00000609071 870 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 AP000676.4-201ENST00000624659 623 ntBASIC1.7□□□□□ -2.14
NUP188Q5SRE5 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
NUP188Q5SRE5 SNORA7.2-201ENST00000364446 145 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 SNORA40.6-201ENST00000391153 128 ntBASIC1.69□□□□□ -2.14
NUP188Q5SRE5 AC074117.2-201ENST00000417130 397 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms