Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 MTCO2P17-201ENST00000424336 677 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 RPL7L1P10-201ENST00000427790 463 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AL590383.1-201ENST00000428602 75 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 ZYG11AP1-201ENST00000430329 837 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AL117351.1-201ENST00000438864 766 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 SDCBPP1-201ENST00000440192 890 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC002381.1-201ENST00000447049 280 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AL359385.1-201ENST00000456509 365 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 RN7SL499P-201ENST00000481141 276 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC117522.3-201ENST00000507974 584 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 CBX3P3-201ENST00000508108 532 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC008413.1-201ENST00000511864 177 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 RNA5SP320-201ENST00000516263 124 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 HSPA8P13-201ENST00000523715 472 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 HSPE1P20-201ENST00000538133 289 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 MTND1P24-201ENST00000552175 861 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC004853.1-201ENST00000604902 698 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AL356585.4-201ENST00000623078 1229 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AC079228.1-201ENST00000624774 1049 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AL356473.1-201ENST00000406203 1408 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 OR4G11P-202ENST00000642116 1414 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 FRG1BP-201ENST00000278882 761 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-777P-201ENST00000364265 104 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 RPL21P75-201ENST00000396599 483 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 RPL21P28-201ENST00000401418 483 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AL592114.1-201ENST00000403842 483 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AL953862.1-201ENST00000423016 168 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 BX119904.4-201ENST00000424402 301 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 MTND5P14-201ENST00000441481 1267 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 RAC1P7-201ENST00000445367 377 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 FTH1P25-201ENST00000447665 469 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 RPL21P39-201ENST00000463605 483 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC128713.1-201ENST00000471495 306 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 RPL21P93-201ENST00000480465 489 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC233702.1-201ENST00000482905 502 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC087190.1-201ENST00000484462 480 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 HMGB1P36-201ENST00000487709 576 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC093591.1-201ENST00000491435 481 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 RPL21P16-201ENST00000495531 483 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 MTCYBP43-201ENST00000513621 740 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 SETP7-201ENST00000552169 453 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC010620.2-201ENST00000600135 313 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 DUXAP11-201ENST00000603858 526 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AL161629.2-201ENST00000615347 275 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 AC010149.2-201ENST00000637608 315 ntBASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHROOM1Q2M3G4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AC097714.1-201ENST00000511272 1647 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 FAM133CP-201ENST00000332869 704 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 SNORA4.1-201ENST00000364263 144 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 SNORD114-30-201ENST00000364448 72 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 MIR135A2-201ENST00000384854 100 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 MTND4P13-201ENST00000402078 1023 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 HMGB1P17-201ENST00000403495 628 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AL139095.1-201ENST00000404326 391 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AL356131.1-201ENST00000405826 414 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 RN7SKP284-201ENST00000411002 343 ntBASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.09□□□□□ -1.91
SHROOM1Q2M3G4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms