Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SSX1Q16384 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSX1Q16384 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SSX1Q16384 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSX1Q16384 RNU5E-8P-201ENST00000363502 116 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 snoZ40.1-201ENST00000364540 72 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC019070.1-201ENST00000415008 1024 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 MTND4P3-201ENST00000417829 541 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC092047.1-201ENST00000424997 240 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX1Q16384 OR4K11P-201ENST00000431829 904 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.03□□□□□ -2.08
SSX1Q16384 AC018634.1-201ENST00000437554 401 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 BNIP3P2-201ENST00000441221 577 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 RPS3AP12-201ENST00000443616 753 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 DDX3P2-201ENST00000446138 111 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX1Q16384 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 RPS3AP14-201ENST00000483907 780 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC097462.2-201ENST00000504623 481 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX1Q16384 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX1Q16384 AC112198.4-201ENST00000515450 351 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX1Q16384 GLYCAM1-201ENST00000546596 285 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC007115.1-201ENST00000546853 234 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX1Q16384 OR1M4P-201ENST00000589199 287 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 MIR92B-201ENST00000607575 96 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AL603758.1-201ENST00000618654 241 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.03□□□□□ -2.08
SSX1Q16384 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 AP003399.1-201ENST00000637534 361 ntBASIC2.03□□□□□ -2.08
SSX1Q16384 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.03□□□□□ -2.08
SSX1Q16384 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.03□□□□□ -2.09
SSX1Q16384 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSX1Q16384 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SSX1Q16384 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSX1Q16384 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SSX1Q16384 Y_RNA.234-201ENST00000364409 97 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 RNU6-343P-201ENST00000364709 104 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 RNU6-1122P-201ENST00000384449 107 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 MIR767-201ENST00000390228 109 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SSX1Q16384 Y_RNA.578-201ENST00000390903 88 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 U3.20-201ENST00000390909 217 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SSX1Q16384 AL513475.1-201ENST00000406602 315 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 MRPS36P1-201ENST00000421291 307 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 AL451062.2-201ENST00000427515 271 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC008850.1-201ENST00000427546 362 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 GTF2IP20-201ENST00000431663 360 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 MTND4P6-201ENST00000438297 472 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 DPPA3P1-201ENST00000448050 469 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 HMGN1P5-201ENST00000448591 263 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC011753.1-201ENST00000451001 220 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 MTND2P24-201ENST00000453434 806 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 RPL18AP17-201ENST00000455326 198 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 SNORD121B-201ENST00000458838 81 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SSX1Q16384 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC002456.2-201ENST00000509356 380 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC113155.1-201ENST00000511141 769 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC006499.2-201ENST00000513470 337 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 RN7SKP132-201ENST00000516001 208 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.02□□□□□ -2.09
SSX1Q16384 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.02□□□□□ -2.09
SSX1Q16384 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC092451.2-201ENST00000538746 658 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SSX1Q16384 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX1Q16384 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.02□□□□□ -2.09
SSX1Q16384 AC105137.2-201ENST00000569073 466 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 MIR1254-2-201ENST00000579553 63 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AL121917.1-203ENST00000605534 577 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC103810.6-201ENST00000606708 136 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC009237.15-201ENST00000610252 501 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC135507.2-201ENST00000612443 309 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC024257.5-201ENST00000612739 531 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AC079395.3-201ENST00000615161 484 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 AL357080.1-201ENST00000617394 239 ntBASIC2.02□□□□□ -2.09
SSX1Q16384 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.02□□□□□ -2.09
SSX1Q16384 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SSX1Q16384 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.01□□□□□ -2.09
SSX1Q16384 RNU6-301P-201ENST00000384277 107 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms