Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXD4Q12950 MTCO3P45-201ENST00000443036 613 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 AL500522.2-201ENST00000448562 343 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXD4Q12950 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXD4Q12950 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXD4Q12950 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD4Q12950 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD4Q12950 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXD4Q12950 FTH1P21-201ENST00000512179 511 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 AC114797.1-201ENST00000514003 728 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 RNU6-56P-201ENST00000516986 93 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 NARSP2-201ENST00000518524 679 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 TRMT10BP1-201ENST00000519377 943 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.68□□□□□ -1.82
FOXD4Q12950 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXD4Q12950 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.68□□□□□ -1.82
FOXD4Q12950 AC128657.1-201ENST00000549459 145 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
FOXD4Q12950 AF038458.1-201ENST00000588406 262 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 AC078899.3-201ENST00000599065 212 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 BRDTP1-201ENST00000605735 677 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 AC064807.4-201ENST00000607201 407 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
FOXD4Q12950 AL392088.2-201ENST00000637607 285 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 AC099654.13-201ENST00000639774 207 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
FOXD4Q12950 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
FOXD4Q12950 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD4Q12950 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD4Q12950 CR848007.1-201ENST00000442354 1699 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
FOXD4Q12950 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
FOXD4Q12950 TEX21P-201ENST00000447107 1476 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXD4Q12950 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 Y_RNA.201-201ENST00000364052 96 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 RNY4P34-201ENST00000364779 95 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 DYNLT3P1-201ENST00000378574 347 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 SNORA75-201ENST00000384158 137 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 RNU6-348P-201ENST00000384386 107 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 MIR888-201ENST00000401186 77 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 Y_RNA.608-201ENST00000410647 95 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 RN7SKP33-201ENST00000410942 340 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 HMGN1P14-201ENST00000412459 517 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 RPS7P13-201ENST00000413955 498 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXD4Q12950 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AL589872.1-201ENST00000426602 288 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AC011742.1-201ENST00000431448 434 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AF228730.2-201ENST00000438784 848 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXD4Q12950 SNORA59A-201ENST00000459326 152 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 RPL7P15-201ENST00000461190 712 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC126182.1-201ENST00000478134 357 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AC114786.4-201ENST00000508771 728 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
FOXD4Q12950 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 RNU6-1003P-201ENST00000517099 105 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.67□□□□□ -1.82
FOXD4Q12950 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AC107934.1-201ENST00000522215 217 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AP002453.2-201ENST00000533503 320 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AL356432.3-201ENST00000568952 465 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC068135.2-201ENST00000569293 1028 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC010653.1-201ENST00000571108 881 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 MTCYBP33-201ENST00000575007 1130 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 MIR5685-201ENST00000579080 79 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 MIR3200-201ENST00000580767 85 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 BNIP3P8-201ENST00000597863 560 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AL606834.2-201ENST00000602954 668 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC006566.1-201ENST00000608943 513 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 BX664608.1-201ENST00000610519 487 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC008498.1-201ENST00000613012 531 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AC009159.1-201ENST00000618386 642 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.67□□□□□ -1.82
FOXD4Q12950 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 AC119674.1-207ENST00000641355 633 ntBASIC3.67□□□□□ -1.82
FOXD4Q12950 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
FOXD4Q12950 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
FOXD4Q12950 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
FOXD4Q12950 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
FOXD4Q12950 MIR19A-201ENST00000384878 82 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms