Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 MIR4637-201ENST00000582405 84 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC040904.1-201ENST00000590850 223 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.66□□□□□ -1.98
CKAP4Q07065 WISP1-OT1-201ENST00000602893 642 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 RPL23AP88-201ENST00000605759 454 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC245008.1-201ENST00000608123 476 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC243773.3-201ENST00000613270 256 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 MIR6810-201ENST00000622701 70 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AF246928.1-201ENST00000623768 87 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 AC099063.3-201ENST00000642066 185 ntBASIC2.66□□□□□ -1.98
CKAP4Q07065 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CKAP4Q07065 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.66□□□□□ -1.98
CKAP4Q07065 ELL2P3-201ENST00000457883 1602 ntBASIC2.65□□□□□ -1.98
CKAP4Q07065 RNU1-112P-201ENST00000364401 164 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 SNORA18.3-201ENST00000384122 132 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 RNU6-253P-201ENST00000384730 105 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC025750.1-201ENST00000399891 379 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AL021407.1-201ENST00000404531 386 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AF274854.1-201ENST00000413236 615 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 Z99497.1-201ENST00000421282 135 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 MTND1P20-201ENST00000430341 950 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 VN1R108P-201ENST00000431580 830 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AL139132.1-201ENST00000431587 344 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC098826.1-201ENST00000433943 471 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 MTND4P6-201ENST00000438297 472 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 CDC27P1-201ENST00000445384 715 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC009961.3-201ENST00000449832 765 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 RPL23AP35-201ENST00000451906 501 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AC097493.1-201ENST00000463958 372 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC114981.1-201ENST00000503897 678 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CKAP4Q07065 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CKAP4Q07065 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AP003467.2-201ENST00000520175 319 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AC092470.1-201ENST00000546187 132 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AC136618.2-201ENST00000575091 400 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 LARP7P2-201ENST00000575306 125 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AL022161.1-201ENST00000604390 213 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.65□□□□□ -1.99
CKAP4Q07065 AL360181.4-201ENST00000621752 134 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.65□□□□□ -1.99
CKAP4Q07065 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.65□□□□□ -1.99
CKAP4Q07065 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.65□□□□□ -1.99
CKAP4Q07065 CUL1P1-201ENST00000509510 2425 ntBASIC2.65□□□□□ -1.99
CKAP4Q07065 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CKAP4Q07065 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 RPL21P132-201ENST00000331267 462 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 Y_RNA.18-201ENST00000362461 102 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RNU6-462P-201ENST00000362659 105 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RNU6-433P-201ENST00000363216 104 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 Y_RNA.302-201ENST00000364997 102 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RNU6-339P-201ENST00000384310 107 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 Y_RNA.560-201ENST00000384689 102 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 MIR449B-201ENST00000384995 97 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 SNRPEP2-201ENST00000397592 279 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 SSXP10-201ENST00000402595 565 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RNU6-920P-201ENST00000410926 92 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RNA5SP492-201ENST00000411330 114 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RPS15AP38-201ENST00000413110 372 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.64□□□□□ -1.99
CKAP4Q07065 SEPT2P1-201ENST00000419651 180 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CKAP4Q07065 AC006548.1-201ENST00000427470 102 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC087499.2-201ENST00000432861 149 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.64□□□□□ -1.99
CKAP4Q07065 UBE2FP3-201ENST00000436366 524 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 MTCYBP39-201ENST00000437562 491 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 UBBP3-201ENST00000445497 241 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CKAP4Q07065 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.64□□□□□ -1.99
CKAP4Q07065 RPL31P3-201ENST00000458430 332 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 RNA5SP310-201ENST00000459084 116 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC026410.2-201ENST00000460281 156 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.64□□□□□ -1.99
CKAP4Q07065 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.64□□□□□ -1.99
CKAP4Q07065 AC106038.2-201ENST00000520706 568 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.64□□□□□ -1.99
CKAP4Q07065 AC087276.1-201ENST00000529659 480 ntBASIC2.64□□□□□ -1.99
CKAP4Q07065 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CKAP4Q07065 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms