Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPL7P25-201ENST00000404151 721 ntBASIC2.91□□□□□ -1.94
LMO4P61968 U3.39-201ENST00000408569 239 ntBASIC2.91□□□□□ -1.94
LMO4P61968 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.91□□□□□ -1.94
LMO4P61968 RPL21P111-201ENST00000418453 477 ntBASIC2.91□□□□□ -1.94
LMO4P61968 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 MTCO2P11-201ENST00000431069 680 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 VDAC1P3-201ENST00000434069 851 ntBASIC2.91□□□□□ -1.94
LMO4P61968 RPL22P17-201ENST00000438729 315 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 BX510359.1-201ENST00000456973 237 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 snoU109.4-201ENST00000458953 143 ntBASIC2.91□□□□□ -1.94
LMO4P61968 VN1R17P-201ENST00000472048 1090 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC026427.2-201ENST00000506228 536 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC018710.1-201ENST00000506509 158 ntBASIC2.91□□□□□ -1.94
LMO4P61968 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 AC010493.1-201ENST00000513479 292 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 RNU2-27P-201ENST00000516185 142 ntBASIC2.91□□□□□ -1.94
LMO4P61968 Y_RNA.672-201ENST00000516289 104 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 COX6CP8-201ENST00000522620 226 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 AP003181.2-201ENST00000528941 181 ntBASIC2.91□□□□□ -1.94
LMO4P61968 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.91□□□□□ -1.94
LMO4P61968 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 AC011611.1-201ENST00000552179 197 ntBASIC2.91□□□□□ -1.94
LMO4P61968 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 AL845331.3-202ENST00000562856 261 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 AC025678.1-201ENST00000567861 338 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC034268.2-201ENST00000571784 482 ntBASIC2.91□□□□□ -1.94
LMO4P61968 KLKP1-201ENST00000595979 403 ntBASIC2.91□□□□□ -1.94
LMO4P61968 XIAPP1-201ENST00000603162 600 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AL035413.2-201ENST00000604801 525 ntBASIC2.91□□□□□ -1.94
LMO4P61968 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 AL445264.1-201ENST00000621719 171 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AC139792.3-201ENST00000623525 224 ntBASIC2.91□□□□□ -1.94
LMO4P61968 AL359697.1-201ENST00000624879 587 ntBASIC2.91□□□□□ -1.94
LMO4P61968 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LMO4P61968 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.91□□□□□ -1.94
LMO4P61968 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LMO4P61968 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC2.91□□□□□ -1.94
LMO4P61968 AL049780.3-201ENST00000624612 1583 ntBASIC2.91□□□□□ -1.94
LMO4P61968 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LMO4P61968 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.9□□□□□ -1.94
LMO4P61968 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
LMO4P61968 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.9□□□□□ -1.94
LMO4P61968 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
LMO4P61968 MTND4P23-201ENST00000447723 1363 ntBASIC2.9□□□□□ -1.94
LMO4P61968 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.9□□□□□ -1.94
LMO4P61968 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
LMO4P61968 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
LMO4P61968 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
LMO4P61968 AL133383.2-201ENST00000622958 2336 ntBASIC2.9□□□□□ -1.95
LMO4P61968 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LMO4P61968 OR5J1P-201ENST00000313544 939 ntBASIC2.9□□□□□ -1.95
LMO4P61968 Y_RNA.46-201ENST00000362695 102 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RNA5SP42-201ENST00000364278 115 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RNU4-76P-201ENST00000364509 141 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RNU6-282P-201ENST00000365357 103 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RNU6-877P-201ENST00000383868 107 ntBASIC2.9□□□□□ -1.95
LMO4P61968 SNORD51-201ENST00000384320 80 ntBASIC2.9□□□□□ -1.95
LMO4P61968 MIR483-201ENST00000385070 76 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AL356776.1-201ENST00000406574 447 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RN7SKP111-201ENST00000410349 271 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RNA5SP120-201ENST00000410900 112 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC017079.2-201ENST00000416102 485 ntBASIC2.9□□□□□ -1.95
LMO4P61968 MTND3P17-201ENST00000416968 344 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.9□□□□□ -1.95
LMO4P61968 CYP4F29P-201ENST00000420685 446 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AL353193.1-201ENST00000421444 268 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RPL21P109-201ENST00000422213 475 ntBASIC2.9□□□□□ -1.95
LMO4P61968 PSMA6P3-201ENST00000428242 164 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC133104.1-201ENST00000429100 218 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.9□□□□□ -1.95
LMO4P61968 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.9□□□□□ -1.95
LMO4P61968 AC002381.1-201ENST00000447049 280 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.9□□□□□ -1.95
LMO4P61968 AL121877.1-201ENST00000453704 622 ntBASIC2.9□□□□□ -1.95
LMO4P61968 snoU13.24-201ENST00000458998 104 ntBASIC2.9□□□□□ -1.95
LMO4P61968 RPS4XP13-201ENST00000483219 789 ntBASIC2.9□□□□□ -1.95
LMO4P61968 FAM172BP-201ENST00000487497 1089 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC007182.2-201ENST00000489251 402 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC093663.1-201ENST00000497190 394 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms