Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 OR1AA1P-201ENST00000419597 916 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RPS15AP6-201ENST00000420703 385 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 CHIAP3-201ENST00000423668 1133 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 OR2AS1P-201ENST00000427827 319 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 MED13P1-201ENST00000428342 171 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RPL23AP1-201ENST00000428990 471 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC005154.2-201ENST00000438110 379 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RPS17P13-201ENST00000448974 407 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RPS29P15-201ENST00000458329 171 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RNU7-59P-201ENST00000459101 61 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 snoU13.1-201ENST00000459157 104 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC010326.1-201ENST00000462726 602 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC126389.1-201ENST00000477436 290 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RN7SL459P-201ENST00000481078 302 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AP001086.1-201ENST00000494882 321 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC092436.1-201ENST00000506450 503 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC026784.1-201ENST00000507986 352 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RNU4-49P-201ENST00000516080 140 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RN7SKP92-201ENST00000517266 244 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AP000857.1-201ENST00000532151 543 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 MIR4775-201ENST00000581168 75 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC004908.2-201ENST00000609090 574 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 uc_338.5-201ENST00000611839 155 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AL021997.2-201ENST00000615674 271 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AL731566.2-201ENST00000618971 317 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC040168.1-201ENST00000623594 991 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 AC125257.1-201ENST00000560400 2930 ntBASIC3.19□□□□□ -1.9
ERVFC1-1P60608 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ERVFC1-1P60608 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 HSPE1P11-201ENST00000339579 310 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RNU6-989P-201ENST00000362756 107 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 SNORA62.1-201ENST00000364287 154 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 Y_RNA.231-201ENST00000364358 102 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 SNORA62-201ENST00000365493 153 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 Y_RNA.474-201ENST00000384341 102 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 MIR3065-201ENST00000390137 79 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RNU6-510P-201ENST00000391239 108 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RNU6-903P-201ENST00000391270 109 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC097374.1-203ENST00000400783 485 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RNU2-47P-201ENST00000410649 186 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 HMGN1P24-201ENST00000412282 298 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 HMGB3P30-201ENST00000457863 606 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RNU6-329P-201ENST00000459618 107 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 MRPS17P3-201ENST00000465453 385 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC117522.3-201ENST00000507974 584 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 TTC39CP1-201ENST00000512513 755 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 HIGD1AP3-201ENST00000515857 278 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RNU4-29P-201ENST00000515943 174 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 RN7SKP234-201ENST00000517173 224 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 HMGB1P41-201ENST00000520234 440 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC011979.2-201ENST00000527568 352 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC009643.1-201ENST00000532030 391 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 OR5B10P-201ENST00000532869 642 ntBASIC3.18□□□□□ -1.9
ERVFC1-1P60608 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms