Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXA3P55318 AC112518.2-201ENST00000508565 425 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.43□□□□□ -2.18
FOXA3P55318 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXA3P55318 AP001646.1-201ENST00000527936 915 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXA3P55318 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
FOXA3P55318 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXA3P55318 AL391261.3-201ENST00000557194 520 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
FOXA3P55318 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXA3P55318 AC024614.2-201ENST00000577584 372 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.43□□□□□ -2.18
FOXA3P55318 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.43□□□□□ -2.18
FOXA3P55318 AC005034.5-201ENST00000604219 466 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 AC007938.3-201ENST00000604965 623 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 AC109809.1-201ENST00000619665 545 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 AC025034.2-201ENST00000623264 286 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 OR1S1-201ENST00000624470 978 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.43□□□□□ -2.18
FOXA3P55318 MIR7157-201ENST00000635801 60 ntBASIC1.43□□□□□ -2.18
FOXA3P55318 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.43□□□□□ -2.18
FOXA3P55318 AC004520.1-201ENST00000608362 1413 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 U3.12-201ENST00000364498 214 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 MIR325-201ENST00000385260 98 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 EIF1AXP1-201ENST00000419267 435 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 AL009174.1-201ENST00000426577 416 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 MICF-203ENST00000432679 129 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 MTND2P21-201ENST00000436242 1042 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXA3P55318 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC004924.1-201ENST00000480160 781 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC093281.2-201ENST00000510153 597 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC091965.2-201ENST00000512324 613 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 AC107393.1-201ENST00000512403 346 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 SNORA31.23-201ENST00000517219 133 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.42□□□□□ -2.18
FOXA3P55318 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.42□□□□□ -2.18
FOXA3P55318 KATNBL1P1-201ENST00000605192 748 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 CR589904.2-201ENST00000612533 440 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 FRG1HP-204ENST00000617940 757 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 AL590396.2-201ENST00000636511 1041 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 AP006437.1-201ENST00000641440 3685 ntBASIC1.42□□□□□ -2.18
FOXA3P55318 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
FOXA3P55318 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXA3P55318 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 SNORA67.3-201ENST00000384366 140 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 RNU1-148P-201ENST00000384472 162 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 MIR147B-201ENST00000390185 80 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 U3.26-201ENST00000391236 204 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AL121978.1-201ENST00000402778 359 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AL450338.1-201ENST00000407987 512 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 RNU2-43P-201ENST00000410306 190 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXA3P55318 AL353689.1-201ENST00000438895 199 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 OR10R1P-201ENST00000441524 1141 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 CDC42P1-201ENST00000456658 548 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXA3P55318 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.41□□□□□ -2.18
FOXA3P55318 RPL23AP42-201ENST00000471152 471 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXA3P55318 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXA3P55318 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXA3P55318 MIR892C-201ENST00000516410 77 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 AC007375.1-201ENST00000554513 578 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXA3P55318 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.41□□□□□ -2.18
FOXA3P55318 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.41□□□□□ -2.18
FOXA3P55318 AL022067.1-201ENST00000602426 454 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AL355297.2-201ENST00000604792 129 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AC026790.2-201ENST00000606282 430 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AC011330.2-201ENST00000621680 635 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AC068057.2-201ENST00000624047 895 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 AC243829.7-201ENST00000633081 225 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
FOXA3P55318 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
FOXA3P55318 OR4G2P-202ENST00000641004 1759 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 ZNF355P-201ENST00000427301 3216 ntBASIC1.41□□□□□ -2.18
FOXA3P55318 MTCO1P18-201ENST00000455518 1419 ntBASIC1.4□□□□□ -2.18
FOXA3P55318 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
FOXA3P55318 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
FOXA3P55318 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
FOXA3P55318 SNORA16.1-201ENST00000364597 132 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms