Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.06□□□□□ -1.92
VCPP55072 RPL21P16-201ENST00000495531 483 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.06□□□□□ -1.92
VCPP55072 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPP55072 RNA5SP24-201ENST00000516478 95 ntBASIC3.06□□□□□ -1.92
VCPP55072 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.06□□□□□ -1.92
VCPP55072 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
VCPP55072 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPP55072 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.06□□□□□ -1.92
VCPP55072 SETP2-201ENST00000553886 926 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC234778.2-201ENST00000566241 354 ntBASIC3.06□□□□□ -1.92
VCPP55072 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPP55072 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.06□□□□□ -1.92
VCPP55072 AC015871.2-201ENST00000603605 948 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC112220.3-201ENST00000605502 502 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC013244.3-201ENST00000605614 388 ntBASIC3.06□□□□□ -1.92
VCPP55072 AL390208.1-201ENST00000605885 644 ntBASIC3.06□□□□□ -1.92
VCPP55072 AP002826.1-201ENST00000608835 315 ntBASIC3.06□□□□□ -1.92
VCPP55072 AL357080.1-201ENST00000617394 239 ntBASIC3.06□□□□□ -1.92
VCPP55072 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.06□□□□□ -1.92
VCPP55072 AL356585.4-201ENST00000623078 1229 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC064859.1-201ENST00000624741 174 ntBASIC3.06□□□□□ -1.92
VCPP55072 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPP55072 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.06□□□□□ -1.92
VCPP55072 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.06□□□□□ -1.92
VCPP55072 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VCPP55072 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
VCPP55072 RNU6-28P-201ENST00000362378 107 ntBASIC3.05□□□□□ -1.92
VCPP55072 U8.2-201ENST00000363156 134 ntBASIC3.05□□□□□ -1.92
VCPP55072 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VCPP55072 AL356131.1-201ENST00000405826 414 ntBASIC3.05□□□□□ -1.92
VCPP55072 RNU2-47P-201ENST00000410649 186 ntBASIC3.05□□□□□ -1.92
VCPP55072 RAP1BP1-201ENST00000412709 553 ntBASIC3.05□□□□□ -1.92
VCPP55072 HIGD1AP15-201ENST00000416198 280 ntBASIC3.05□□□□□ -1.92
VCPP55072 MTCO2P21-201ENST00000419780 677 ntBASIC3.05□□□□□ -1.92
VCPP55072 AL137014.1-201ENST00000420490 1226 ntBASIC3.05□□□□□ -1.92
VCPP55072 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.05□□□□□ -1.92
VCPP55072 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.05□□□□□ -1.92
VCPP55072 XKRYP1-201ENST00000423438 492 ntBASIC3.05□□□□□ -1.92
VCPP55072 XKRYP2-201ENST00000432915 492 ntBASIC3.05□□□□□ -1.92
VCPP55072 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.05□□□□□ -1.92
VCPP55072 MTCYBP45-201ENST00000435243 565 ntBASIC3.05□□□□□ -1.92
VCPP55072 RPS29P6-201ENST00000438196 145 ntBASIC3.05□□□□□ -1.92
VCPP55072 AL603825.1-201ENST00000438481 80 ntBASIC3.05□□□□□ -1.92
VCPP55072 SDCBPP1-201ENST00000440192 890 ntBASIC3.05□□□□□ -1.92
VCPP55072 Z96811.1-201ENST00000445880 108 ntBASIC3.05□□□□□ -1.92
VCPP55072 WASF1P1-201ENST00000447560 1131 ntBASIC3.05□□□□□ -1.92
VCPP55072 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.05□□□□□ -1.92
VCPP55072 USP9YP10-201ENST00000454868 628 ntBASIC3.05□□□□□ -1.92
VCPP55072 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.05□□□□□ -1.92
VCPP55072 FAM172BP-201ENST00000487497 1089 ntBASIC3.05□□□□□ -1.92
VCPP55072 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.05□□□□□ -1.92
VCPP55072 AC093281.2-201ENST00000510153 597 ntBASIC3.05□□□□□ -1.92
VCPP55072 AC008549.1-201ENST00000512900 643 ntBASIC3.05□□□□□ -1.92
VCPP55072 AC105185.1-201ENST00000518705 535 ntBASIC3.05□□□□□ -1.92
VCPP55072 MRPS36P3-201ENST00000519284 130 ntBASIC3.05□□□□□ -1.92
VCPP55072 OR5G4P-201ENST00000525251 760 ntBASIC3.05□□□□□ -1.92
VCPP55072 AP000867.2-201ENST00000532468 320 ntBASIC3.05□□□□□ -1.92
VCPP55072 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.05□□□□□ -1.92
VCPP55072 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.05□□□□□ -1.92
VCPP55072 AL158827.2-201ENST00000602494 330 ntBASIC3.05□□□□□ -1.92
VCPP55072 AC022022.2-201ENST00000602989 360 ntBASIC3.05□□□□□ -1.92
VCPP55072 AC012119.1-201ENST00000603184 222 ntBASIC3.05□□□□□ -1.92
VCPP55072 AC069234.5-201ENST00000611056 416 ntBASIC3.05□□□□□ -1.92
VCPP55072 AL596245.1-201ENST00000618994 362 ntBASIC3.05□□□□□ -1.92
VCPP55072 AL691447.3-201ENST00000635020 330 ntBASIC3.05□□□□□ -1.92
VCPP55072 LRRC77P-213ENST00000637727 880 ntBASIC3.05□□□□□ -1.92
VCPP55072 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPP55072 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VCPP55072 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
VCPP55072 DDX43P2-201ENST00000604753 1354 ntBASIC3.04□□□□□ -1.92
VCPP55072 SNORD113-6-201ENST00000363345 75 ntBASIC3.04□□□□□ -1.92
VCPP55072 MIR181B1-201ENST00000385240 110 ntBASIC3.04□□□□□ -1.92
VCPP55072 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
VCPP55072 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPP55072 BX276092.3-201ENST00000424182 230 ntBASIC3.04□□□□□ -1.92
VCPP55072 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPP55072 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VCPP55072 NDUFB4P6-201ENST00000436819 366 ntBASIC3.04□□□□□ -1.92
VCPP55072 RAC1P7-201ENST00000445367 377 ntBASIC3.04□□□□□ -1.92
VCPP55072 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPP55072 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPP55072 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPP55072 ANKRD26P4-201ENST00000455755 950 ntBASIC3.04□□□□□ -1.92
VCPP55072 BX322784.1-201ENST00000455793 1077 ntBASIC3.04□□□□□ -1.92
VCPP55072 HSPE1P6-201ENST00000479457 291 ntBASIC3.04□□□□□ -1.92
VCPP55072 AC006445.2-201ENST00000510061 472 ntBASIC3.04□□□□□ -1.92
VCPP55072 RAC1P5-201ENST00000512182 576 ntBASIC3.04□□□□□ -1.92
VCPP55072 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.04□□□□□ -1.92
VCPP55072 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
VCPP55072 AC125611.2-201ENST00000551907 647 ntBASIC3.04□□□□□ -1.92
VCPP55072 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.04□□□□□ -1.92
VCPP55072 SNORD53-201ENST00000579969 78 ntBASIC3.04□□□□□ -1.92
VCPP55072 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.04□□□□□ -1.92
VCPP55072 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.04□□□□□ -1.92
VCPP55072 AC004853.1-201ENST00000604902 698 ntBASIC3.04□□□□□ -1.92
VCPP55072 AL133507.1-201ENST00000605269 557 ntBASIC3.04□□□□□ -1.92
VCPP55072 TUSC7.1-201ENST00000610969 165 ntBASIC3.04□□□□□ -1.92
VCPP55072 AL445264.1-201ENST00000621719 171 ntBASIC3.04□□□□□ -1.92
VCPP55072 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms