Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.78□□□□□ -1.64
PMS1P54277 AL592182.3-201ENST00000642132 3304 ntBASIC4.78□□□□□ -1.64
PMS1P54277 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.77□□□□□ -1.65
PMS1P54277 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PMS1P54277 RN7SKP103-201ENST00000363848 320 ntBASIC4.77□□□□□ -1.65
PMS1P54277 Y_RNA.197-201ENST00000364004 102 ntBASIC4.77□□□□□ -1.65
PMS1P54277 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
PMS1P54277 Y_RNA.395-201ENST00000383945 109 ntBASIC4.77□□□□□ -1.65
PMS1P54277 Y_RNA.482-201ENST00000384377 111 ntBASIC4.77□□□□□ -1.65
PMS1P54277 SNORA16.2-201ENST00000390991 127 ntBASIC4.77□□□□□ -1.65
PMS1P54277 CISD1P1-201ENST00000393907 327 ntBASIC4.77□□□□□ -1.65
PMS1P54277 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.77□□□□□ -1.65
PMS1P54277 AL162591.2-201ENST00000449634 317 ntBASIC4.77□□□□□ -1.65
PMS1P54277 MRPS31P2-201ENST00000451581 518 ntBASIC4.77□□□□□ -1.65
PMS1P54277 AC009963.2-201ENST00000453431 138 ntBASIC4.77□□□□□ -1.65
PMS1P54277 RPL30P15-201ENST00000457129 321 ntBASIC4.77□□□□□ -1.65
PMS1P54277 AC022795.1-201ENST00000473808 480 ntBASIC4.77□□□□□ -1.65
PMS1P54277 AP002812.1-201ENST00000495378 474 ntBASIC4.77□□□□□ -1.65
PMS1P54277 AC108145.1-201ENST00000503770 153 ntBASIC4.77□□□□□ -1.65
PMS1P54277 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.77□□□□□ -1.65
PMS1P54277 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.77□□□□□ -1.65
PMS1P54277 AC090115.3-201ENST00000553218 849 ntBASIC4.77□□□□□ -1.65
PMS1P54277 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.77□□□□□ -1.65
PMS1P54277 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.77□□□□□ -1.65
PMS1P54277 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.77□□□□□ -1.65
PMS1P54277 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.77□□□□□ -1.65
PMS1P54277 AC010680.4-201ENST00000605334 543 ntBASIC4.77□□□□□ -1.65
PMS1P54277 AC007619.2-201ENST00000605743 379 ntBASIC4.77□□□□□ -1.65
PMS1P54277 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.77□□□□□ -1.65
PMS1P54277 SDR42E1P2-201ENST00000614861 481 ntBASIC4.77□□□□□ -1.65
PMS1P54277 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PMS1P54277 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.77□□□□□ -1.65
PMS1P54277 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PMS1P54277 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.76□□□□□ -1.65
PMS1P54277 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PMS1P54277 MAPK10-263ENST00000641052 4307 ntBASIC4.76□□□□□ -1.65
PMS1P54277 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 RNA5SP52-201ENST00000362448 134 ntBASIC4.76□□□□□ -1.65
PMS1P54277 RNU6-1188P-201ENST00000363795 107 ntBASIC4.76□□□□□ -1.65
PMS1P54277 Y_RNA.399-201ENST00000383955 105 ntBASIC4.76□□□□□ -1.65
PMS1P54277 RNU6-434P-201ENST00000384376 107 ntBASIC4.76□□□□□ -1.65
PMS1P54277 RNU6-601P-201ENST00000384540 107 ntBASIC4.76□□□□□ -1.65
PMS1P54277 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PMS1P54277 RNA5SP332-201ENST00000391063 115 ntBASIC4.76□□□□□ -1.65
PMS1P54277 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 RPL7AP73-201ENST00000413490 353 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.76□□□□□ -1.65
PMS1P54277 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.76□□□□□ -1.65
PMS1P54277 FAR2P4-202ENST00000425399 584 ntBASIC4.76□□□□□ -1.65
PMS1P54277 SKA2P1-201ENST00000425592 390 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.76□□□□□ -1.65
PMS1P54277 AC006466.1-201ENST00000438721 289 ntBASIC4.76□□□□□ -1.65
PMS1P54277 RPL23AP52-201ENST00000439311 478 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.76□□□□□ -1.65
PMS1P54277 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.76□□□□□ -1.65
PMS1P54277 RNU7-167P-201ENST00000459160 62 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.76□□□□□ -1.65
PMS1P54277 AC104164.2-201ENST00000496953 495 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC008526.1-201ENST00000509149 338 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.76□□□□□ -1.65
PMS1P54277 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.76□□□□□ -1.65
PMS1P54277 RN7SKP60-201ENST00000516985 239 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.76□□□□□ -1.65
PMS1P54277 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.76□□□□□ -1.65
PMS1P54277 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.76□□□□□ -1.65
PMS1P54277 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.76□□□□□ -1.65
PMS1P54277 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.76□□□□□ -1.65
PMS1P54277 AC018630.1-201ENST00000541376 925 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.76□□□□□ -1.65
PMS1P54277 AC067852.3-201ENST00000589177 561 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AL138726.1-201ENST00000614873 333 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AC133104.2-201ENST00000615272 193 ntBASIC4.76□□□□□ -1.65
PMS1P54277 AL021997.2-201ENST00000615674 271 ntBASIC4.76□□□□□ -1.65
PMS1P54277 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.76□□□□□ -1.65
PMS1P54277 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PMS1P54277 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.76□□□□□ -1.65
PMS1P54277 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.76□□□□□ -1.65
PMS1P54277 OR56B2P-202ENST00000641377 2453 ntBASIC4.75□□□□□ -1.65
PMS1P54277 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
PMS1P54277 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.75□□□□□ -1.65
PMS1P54277 OR5P1P-201ENST00000299512 925 ntBASIC4.75□□□□□ -1.65
PMS1P54277 RNU6-715P-201ENST00000365204 103 ntBASIC4.75□□□□□ -1.65
PMS1P54277 RNU6-639P-201ENST00000384074 107 ntBASIC4.75□□□□□ -1.65
PMS1P54277 SNORD3H-201ENST00000384486 214 ntBASIC4.75□□□□□ -1.65
PMS1P54277 MIR129-1-201ENST00000384972 72 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms