Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK1P53667 AP000907.2-201ENST00000530827 353 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.32□□□□□ -1.88
LIMK1P53667 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.32□□□□□ -1.88
LIMK1P53667 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK1P53667 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.32□□□□□ -1.88
LIMK1P53667 AC068790.3-201ENST00000602988 553 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK1P53667 AC091931.1-201ENST00000623488 728 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 AL137790.1-201ENST00000634283 177 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK1P53667 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.32□□□□□ -1.88
LIMK1P53667 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.32□□□□□ -1.88
LIMK1P53667 AC099654.7-201ENST00000635788 2127 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.32□□□□□ -1.88
LIMK1P53667 AC008568.2-201ENST00000623862 2313 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LIMK1P53667 AC006378.2-201ENST00000623178 2476 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RNU5E-8P-201ENST00000363502 116 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 AC007899.1-201ENST00000412776 775 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 PPP1R11P2-201ENST00000423543 382 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RPL35AP12-201ENST00000425362 338 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AC008850.1-201ENST00000427546 362 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 SAR1AP4-201ENST00000429225 591 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.31□□□□□ -1.88
LIMK1P53667 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RN7SL594P-201ENST00000470590 287 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RPL30P6-201ENST00000475925 342 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AL049874.1-201ENST00000489560 388 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.31□□□□□ -1.88
LIMK1P53667 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.31□□□□□ -1.88
LIMK1P53667 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.31□□□□□ -1.88
LIMK1P53667 AC109464.2-201ENST00000510242 943 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.31□□□□□ -1.88
LIMK1P53667 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.31□□□□□ -1.88
LIMK1P53667 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.31□□□□□ -1.88
LIMK1P53667 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.31□□□□□ -1.88
LIMK1P53667 MTND4LP18-201ENST00000526864 291 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.31□□□□□ -1.88
LIMK1P53667 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.31□□□□□ -1.88
LIMK1P53667 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.31□□□□□ -1.88
LIMK1P53667 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.31□□□□□ -1.88
LIMK1P53667 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 MIR3921-201ENST00000577308 85 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 MIR3609-201ENST00000582661 80 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 MIR4307-201ENST00000582802 84 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AC105224.1-201ENST00000587055 421 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RPL23AP78-201ENST00000599928 470 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AC078883.4-201ENST00000623218 367 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LIMK1P53667 MIR4275-201ENST00000636486 87 ntBASIC3.31□□□□□ -1.88
LIMK1P53667 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
LIMK1P53667 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LIMK1P53667 CCT4P2-201ENST00000233836 1548 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.3□□□□□ -1.88
LIMK1P53667 AL445523.1-201ENST00000451184 1362 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LIMK1P53667 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LIMK1P53667 RNU6-500P-201ENST00000362349 107 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AL445529.1-201ENST00000398713 389 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 CCNG1P1-201ENST00000406783 885 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 UBE2FP1-201ENST00000416536 447 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 VPS26BP1-201ENST00000417155 755 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 USP9YP26-201ENST00000421008 661 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.3□□□□□ -1.88
LIMK1P53667 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.3□□□□□ -1.88
LIMK1P53667 RPL22P17-201ENST00000438729 315 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.3□□□□□ -1.88
LIMK1P53667 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.3□□□□□ -1.88
LIMK1P53667 MTCO1P42-201ENST00000457379 726 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 RPS27P29-201ENST00000463110 252 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 HSPE1P6-201ENST00000479457 291 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AC135721.1-201ENST00000497954 479 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 MTND1P22-201ENST00000510572 951 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 PSMA2P1-201ENST00000526365 646 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.3□□□□□ -1.88
LIMK1P53667 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.3□□□□□ -1.88
LIMK1P53667 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.3□□□□□ -1.88
LIMK1P53667 BCRP9-201ENST00000605312 388 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 OR10AB1P-201ENST00000609613 938 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AC007494.3-201ENST00000624660 743 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AC093591.3-201ENST00000634516 308 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AL732372.2-225ENST00000642124 456 ntBASIC3.3□□□□□ -1.88
LIMK1P53667 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms