Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.7□□□□□ -2.14
GTF2A1P52655 AC104090.1-201ENST00000506341 1171 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.7□□□□□ -2.14
GTF2A1P52655 RNU6-1095P-201ENST00000516148 108 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.7□□□□□ -2.14
GTF2A1P52655 AC022616.2-201ENST00000523185 300 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.7□□□□□ -2.14
GTF2A1P52655 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
GTF2A1P52655 AC115989.2-201ENST00000578640 563 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 YWHAEP7-203ENST00000622054 312 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 OR5H6-203ENST00000642105 978 ntBASIC1.7□□□□□ -2.14
GTF2A1P52655 AL356473.1-201ENST00000406203 1408 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.69□□□□□ -2.14
GTF2A1P52655 AL109913.1-201ENST00000421173 514 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.69□□□□□ -2.14
GTF2A1P52655 MTCO3P46-201ENST00000425787 232 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 AC006946.1-201ENST00000429106 328 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.69□□□□□ -2.14
GTF2A1P52655 RPL21P134-201ENST00000453468 483 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 HMGN1P8-201ENST00000463578 288 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
GTF2A1P52655 AC104164.3-201ENST00000467363 1258 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 FO393415.2-201ENST00000480085 343 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 AC107032.1-201ENST00000485945 480 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.69□□□□□ -2.14
GTF2A1P52655 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.69□□□□□ -2.14
GTF2A1P52655 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.69□□□□□ -2.14
GTF2A1P52655 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.69□□□□□ -2.14
GTF2A1P52655 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.69□□□□□ -2.14
GTF2A1P52655 MTCYBP27-201ENST00000555160 670 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
GTF2A1P52655 MIR5571-201ENST00000577998 113 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 AC243960.4-201ENST00000600532 288 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
GTF2A1P52655 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
GTF2A1P52655 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.69□□□□□ -2.14
GTF2A1P52655 AC010872.1-201ENST00000624225 675 ntBASIC1.69□□□□□ -2.14
GTF2A1P52655 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.69□□□□□ -2.14
GTF2A1P52655 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
GTF2A1P52655 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.69□□□□□ -2.14
GTF2A1P52655 RNU6-1159P-201ENST00000362933 107 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 AL035405.1-201ENST00000400795 710 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 RNU2-2P-201ENST00000410396 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.68□□□□□ -2.14
GTF2A1P52655 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.68□□□□□ -2.14
GTF2A1P52655 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.68□□□□□ -2.14
GTF2A1P52655 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.68□□□□□ -2.14
GTF2A1P52655 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.68□□□□□ -2.14
GTF2A1P52655 AC104108.1-201ENST00000509930 412 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 TPT1P8-201ENST00000510120 555 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
GTF2A1P52655 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.68□□□□□ -2.14
GTF2A1P52655 ARL2BPP2-201ENST00000550907 489 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.68□□□□□ -2.14
GTF2A1P52655 AC103710.1-201ENST00000610003 901 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.15-201ENST00000611544 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.16-201ENST00000613119 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.12-201ENST00000613778 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.20-201ENST00000613956 192 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.9-201ENST00000615427 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 MIR7974-201ENST00000615835 79 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.11-201ENST00000616345 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.2-201ENST00000616535 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.3-201ENST00000617785 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.19-201ENST00000618602 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 RNU2-1-201ENST00000618664 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.6-201ENST00000619225 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.5-201ENST00000619465 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 U2.10-201ENST00000620268 191 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 AP003400.5-201ENST00000624827 617 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.68□□□□□ -2.14
GTF2A1P52655 AC025263.3-201ENST00000622965 1396 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
GTF2A1P52655 AC010329.5-201ENST00000623497 2174 ntBASIC1.68□□□□□ -2.14
GTF2A1P52655 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
GTF2A1P52655 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
GTF2A1P52655 MIR934-201ENST00000401241 83 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 Z92545.1-201ENST00000411782 234 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.67□□□□□ -2.14
GTF2A1P52655 DDX3P2-201ENST00000446138 111 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.67□□□□□ -2.14
GTF2A1P52655 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 SCARNA11.3-201ENST00000517276 130 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 MIR3162-201ENST00000581818 82 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.67□□□□□ -2.14
GTF2A1P52655 AC079791.1-201ENST00000605356 973 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 AC097504.2-201ENST00000608088 454 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.67□□□□□ -2.14
GTF2A1P52655 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.67□□□□□ -2.14
GTF2A1P52655 AC046144.1-201ENST00000478559 1853 ntBASIC1.67□□□□□ -2.14
GTF2A1P52655 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms