Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD4P46934 AP001350.1-201ENST00000601906 1524 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD4P46934 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD4P46934 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD4P46934 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD4P46934 RNU6-97P-201ENST00000363387 104 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 MIR607-201ENST00000385241 96 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AL356421.1-201ENST00000403255 413 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 RNU2-47P-201ENST00000410649 186 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 YPEL5P1-201ENST00000419731 367 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 BEND7P1-201ENST00000422058 457 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD4P46934 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD4P46934 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD4P46934 MTND1P9-201ENST00000453775 944 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 SNORD121B-201ENST00000458838 81 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 SNRPGP3-201ENST00000469405 227 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AC092451.1-201ENST00000480211 153 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.16□□□□□ -1.9
NEDD4P46934 AC010486.3-201ENST00000511602 785 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD4P46934 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD4P46934 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD4P46934 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 SETP2-201ENST00000553886 926 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD4P46934 MIR4635-201ENST00000583759 79 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD4P46934 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD4P46934 Z99497.2-201ENST00000603634 310 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AC011451.2-201ENST00000604303 598 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AC106028.5-201ENST00000610332 395 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AL590282.1-201ENST00000610379 1136 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD4P46934 AF246928.1-201ENST00000623768 87 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 SNORA50A-202ENST00000629536 136 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 MIR3974-201ENST00000637126 96 ntBASIC3.16□□□□□ -1.9
NEDD4P46934 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NEDD4P46934 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NEDD4P46934 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NEDD4P46934 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 RNU6-859P-201ENST00000362728 107 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NEDD4P46934 AL512633.1-201ENST00000399931 655 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 SNORD88.1-201ENST00000408684 91 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD4P46934 RNU6-920P-201ENST00000410926 92 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD4P46934 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD4P46934 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD4P46934 NUP35P1-201ENST00000422734 947 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.15□□□□□ -1.91
NEDD4P46934 ARL5AP4-201ENST00000430731 512 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 AL121871.1-201ENST00000443413 436 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 MTATP6P26-201ENST00000445926 662 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AP000542.1-201ENST00000448473 371 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AL109933.2-201ENST00000452651 260 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD4P46934 AC010285.1-201ENST00000470580 392 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC004924.1-201ENST00000480160 781 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 RNU2-58P-201ENST00000516403 183 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 RNU6-759P-201ENST00000516740 103 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 SNORA31.21-201ENST00000517180 77 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC103783.1-201ENST00000520506 373 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.15□□□□□ -1.91
NEDD4P46934 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.15□□□□□ -1.91
NEDD4P46934 PCMTD1P2-201ENST00000565017 355 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC087481.2-201ENST00000565492 330 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD4P46934 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD4P46934 AC006504.3-201ENST00000586818 523 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 BNIP3P23-201ENST00000599655 511 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC013444.2-201ENST00000603317 787 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC008277.2-201ENST00000605196 797 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC107214.2-201ENST00000608204 634 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC002550.2-201ENST00000621246 394 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 AC008443.7-201ENST00000622195 246 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD4P46934 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.15□□□□□ -1.91
NEDD4P46934 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD4P46934 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD4P46934 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD4P46934 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD4P46934 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NEDD4P46934 RNY4P24-201ENST00000362735 96 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 RNU6-1155P-201ENST00000363554 107 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 RNU6-660P-201ENST00000364566 109 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 RNU6-1207P-201ENST00000384343 107 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 Y_RNA.560-201ENST00000384689 102 ntBASIC3.14□□□□□ -1.91
NEDD4P46934 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NEDD4P46934 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms