Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC058791.1-201ENST00000608412 3198 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PTPN9P43378 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN9P43378 AC005832.2-201ENST00000538921 1430 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN9P43378 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPN9P43378 OR1S2-201ENST00000302592 978 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 RNU6-511P-201ENST00000363496 107 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 RNU6-1284P-201ENST00000363701 100 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 RNY1P12-201ENST00000364251 105 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 SNORA73.2-201ENST00000364946 201 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN9P43378 SNORA20.2-201ENST00000383922 131 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PTPN9P43378 PTMAP2-201ENST00000397627 327 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN9P43378 RPS15AP12-201ENST00000419498 388 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN9P43378 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN9P43378 TIMM9P3-201ENST00000428659 274 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN9P43378 AL158071.1-201ENST00000430315 461 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 RPL31P35-201ENST00000431058 377 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 ATP5JP1-201ENST00000431631 322 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 HSPD1P21-201ENST00000436541 245 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AL138799.3-201ENST00000438968 350 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 MTCO3P45-201ENST00000443036 613 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN9P43378 AC132479.1-201ENST00000449160 144 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AC093392.2-201ENST00000450682 337 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 C1DP4-201ENST00000455429 424 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 RPS27AP1-201ENST00000475545 471 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AC004924.1-201ENST00000480160 781 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN9P43378 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPN9P43378 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN9P43378 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN9P43378 SNORA70.19-201ENST00000516717 90 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN9P43378 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPN9P43378 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.63□□□□□ -1.83
PTPN9P43378 AC125611.2-201ENST00000551907 647 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AL845331.3-202ENST00000562856 261 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AC006023.2-201ENST00000609916 167 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 U4.5-201ENST00000617137 123 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 AP001148.1-201ENST00000624124 2359 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN9P43378 AL356274.2-201ENST00000624379 3752 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPN9P43378 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
PTPN9P43378 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN9P43378 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 SDAD1P2-201ENST00000441308 2028 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 AC032011.1-201ENST00000611703 1549 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PTPN9P43378 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PTPN9P43378 HSPE1P11-201ENST00000339579 310 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RNU6-76P-201ENST00000384060 104 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN9P43378 CRYBB2P1-203ENST00000415709 538 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 ELOCP4-201ENST00000420090 333 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN9P43378 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 AP000907.1-201ENST00000428428 510 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 TXNP1-201ENST00000441872 371 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RPL21P23-201ENST00000446654 460 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN9P43378 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 RPS4XP2-201ENST00000458402 793 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AC126182.1-201ENST00000478134 357 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 RPL9P6-201ENST00000492764 598 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 RNU2-10P-201ENST00000516375 211 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RNU2-58P-201ENST00000516403 183 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RN7SKP244-201ENST00000516513 307 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RNU6-506P-201ENST00000516553 94 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RNU6-64P-201ENST00000517119 105 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 RNU6-1073P-201ENST00000517182 106 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AC022616.3-201ENST00000523940 148 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 AC016957.1-201ENST00000534895 309 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.62□□□□□ -1.83
PTPN9P43378 CCNG2P1-201ENST00000549521 1000 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.62□□□□□ -1.83
PTPN9P43378 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.62□□□□□ -1.83
PTPN9P43378 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPN9P43378 FAM60BP-201ENST00000578364 658 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 MIR4293-201ENST00000584305 78 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AC105224.1-201ENST00000587055 421 ntBASIC3.62□□□□□ -1.83
PTPN9P43378 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms