Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.14□□□□□ -2.23
HTTP42858 SUMO2P4-201ENST00000504193 276 ntBASIC1.14□□□□□ -2.23
HTTP42858 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.14□□□□□ -2.23
HTTP42858 JTBP1-201ENST00000441314 247 ntBASIC1.14□□□□□ -2.23
HTTP42858 AP000926.1-201ENST00000479573 241 ntBASIC1.14□□□□□ -2.23
HTTP42858 AC005912.1-201ENST00000495392 255 ntBASIC1.14□□□□□ -2.23
HTTP42858 OR8X1P-201ENST00000534542 869 ntBASIC1.14□□□□□ -2.23
HTTP42858 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.14□□□□□ -2.23
HTTP42858 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.14□□□□□ -2.23
HTTP42858 RNU11-5P-201ENST00000391216 129 ntBASIC1.13□□□□□ -2.23
HTTP42858 HMGB1P13-201ENST00000406019 642 ntBASIC1.13□□□□□ -2.23
HTTP42858 MRPS36P1-201ENST00000421291 307 ntBASIC1.13□□□□□ -2.23
HTTP42858 AL121601.2-201ENST00000438019 707 ntBASIC1.13□□□□□ -2.23
HTTP42858 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.13□□□□□ -2.23
HTTP42858 AC107918.3-201ENST00000533272 382 ntBASIC1.13□□□□□ -2.23
HTTP42858 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.13□□□□□ -2.23
HTTP42858 AL135786.2-201ENST00000608422 615 ntBASIC1.13□□□□□ -2.23
HTTP42858 TATDN1P1-201ENST00000414123 891 ntBASIC1.13□□□□□ -2.23
HTTP42858 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.13□□□□□ -2.23
HTTP42858 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.13□□□□□ -2.23
HTTP42858 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.13□□□□□ -2.23
HTTP42858 RNA5SP364-201ENST00000516938 78 ntBASIC1.13□□□□□ -2.23
HTTP42858 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.13□□□□□ -2.23
HTTP42858 GAS5-AS1-201ENST00000602767 694 ntBASIC1.13□□□□□ -2.23
HTTP42858 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HTTP42858 RNA5SP465-201ENST00000391195 109 ntBASIC1.13□□□□□ -2.23
HTTP42858 OR51A5P-201ENST00000415429 942 ntBASIC1.13□□□□□ -2.23
HTTP42858 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.13□□□□□ -2.23
HTTP42858 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
HTTP42858 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.13□□□□□ -2.23
HTTP42858 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.12□□□□□ -2.23
HTTP42858 RN7SKP51-201ENST00000410781 304 ntBASIC1.12□□□□□ -2.23
HTTP42858 AC004854.1-201ENST00000440356 349 ntBASIC1.12□□□□□ -2.23
HTTP42858 RPL21P131-201ENST00000497298 483 ntBASIC1.12□□□□□ -2.23
HTTP42858 AC005498.1-201ENST00000592125 465 ntBASIC1.12□□□□□ -2.23
HTTP42858 DUXAP3-201ENST00000603616 594 ntBASIC1.12□□□□□ -2.23
HTTP42858 AC091925.1-201ENST00000623204 462 ntBASIC1.12□□□□□ -2.23
HTTP42858 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HTTP42858 AC013470.3-201ENST00000420252 1194 ntBASIC1.12□□□□□ -2.23
HTTP42858 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.12□□□□□ -2.23
HTTP42858 RPS29P23-201ENST00000458635 123 ntBASIC1.12□□□□□ -2.23
HTTP42858 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.12□□□□□ -2.23
HTTP42858 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.12□□□□□ -2.23
HTTP42858 BNIP3P7-201ENST00000605641 516 ntBASIC1.12□□□□□ -2.23
HTTP42858 AC017076.1-201ENST00000607613 578 ntBASIC1.12□□□□□ -2.23
HTTP42858 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HTTP42858 GDI2P2-201ENST00000445131 608 ntBASIC1.11□□□□□ -2.23
HTTP42858 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.11□□□□□ -2.23
HTTP42858 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.11□□□□□ -2.23
HTTP42858 AC007742.2-201ENST00000618226 398 ntBASIC1.11□□□□□ -2.23
HTTP42858 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
HTTP42858 MTND4P12-201ENST00000498999 1377 ntBASIC1.11□□□□□ -2.23
HTTP42858 AL161722.3-201ENST00000605789 2983 ntBASIC1.11□□□□□ -2.23
HTTP42858 AL136164.4-201ENST00000625013 2135 ntBASIC1.11□□□□□ -2.23
HTTP42858 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.11□□□□□ -2.23
HTTP42858 FCF1P2-201ENST00000415284 583 ntBASIC1.11□□□□□ -2.23
HTTP42858 AC109583.1-201ENST00000432156 268 ntBASIC1.11□□□□□ -2.23
HTTP42858 OR51B8P-201ENST00000449892 769 ntBASIC1.11□□□□□ -2.23
HTTP42858 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.11□□□□□ -2.23
HTTP42858 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.11□□□□□ -2.23
HTTP42858 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.11□□□□□ -2.23
HTTP42858 AL354685.2-201ENST00000448218 1447 ntBASIC1.1□□□□□ -2.23
HTTP42858 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HTTP42858 AC090515.1-201ENST00000465295 476 ntBASIC1.1□□□□□ -2.23
HTTP42858 GOLGA5P1-201ENST00000507317 980 ntBASIC1.1□□□□□ -2.23
HTTP42858 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.1□□□□□ -2.23
HTTP42858 MIR4711-201ENST00000578274 70 ntBASIC1.1□□□□□ -2.23
HTTP42858 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.1□□□□□ -2.23
HTTP42858 RNU6-603P-201ENST00000411403 107 ntBASIC1.1□□□□□ -2.23
HTTP42858 RPL30P4-201ENST00000429309 333 ntBASIC1.1□□□□□ -2.23
HTTP42858 AL121871.1-201ENST00000443413 436 ntBASIC1.1□□□□□ -2.23
HTTP42858 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.1□□□□□ -2.23
HTTP42858 SNX5P1-201ENST00000505757 1041 ntBASIC1.1□□□□□ -2.23
HTTP42858 AC114322.1-201ENST00000506771 926 ntBASIC1.1□□□□□ -2.23
HTTP42858 LRRC34P2-201ENST00000514850 553 ntBASIC1.1□□□□□ -2.23
HTTP42858 AC121758.2-201ENST00000553271 193 ntBASIC1.1□□□□□ -2.23
HTTP42858 MTCO1P40-201ENST00000574371 625 ntBASIC1.1□□□□□ -2.23
HTTP42858 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
HTTP42858 AC092140.2-201ENST00000618027 521 ntBASIC1.1□□□□□ -2.23
HTTP42858 AL118496.1-201ENST00000440201 1812 ntBASIC1.09□□□□□ -2.23
HTTP42858 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.09□□□□□ -2.23
HTTP42858 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.09□□□□□ -2.23
HTTP42858 COX6CP18-201ENST00000448769 222 ntBASIC1.09□□□□□ -2.23
HTTP42858 AC090517.3-201ENST00000625170 141 ntBASIC1.09□□□□□ -2.23
HTTP42858 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
HTTP42858 AC008669.1-201ENST00000565823 2178 ntBASIC1.09□□□□□ -2.23
HTTP42858 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
HTTP42858 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.09□□□□□ -2.24
HTTP42858 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.09□□□□□ -2.24
HTTP42858 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.09□□□□□ -2.24
HTTP42858 AC012181.1-201ENST00000479895 423 ntBASIC1.09□□□□□ -2.24
HTTP42858 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.09□□□□□ -2.24
HTTP42858 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.09□□□□□ -2.24
HTTP42858 VTA1P2-201ENST00000520205 911 ntBASIC1.09□□□□□ -2.24
HTTP42858 AP004247.1-201ENST00000531556 1289 ntBASIC1.09□□□□□ -2.24
HTTP42858 RPL23AP88-201ENST00000605759 454 ntBASIC1.09□□□□□ -2.24
HTTP42858 RNA5SP193-201ENST00000410353 107 ntBASIC1.09□□□□□ -2.24
HTTP42858 RPL27AP8-201ENST00000424277 446 ntBASIC1.09□□□□□ -2.24
HTTP42858 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.09□□□□□ -2.24
HTTP42858 MIR5694-201ENST00000581190 76 ntBASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms