Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOBEC1P41238 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
APOBEC1P41238 MTND4P5-201ENST00000435821 1374 ntBASIC3.25□□□□□ -1.89
APOBEC1P41238 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOBEC1P41238 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.24□□□□□ -1.89
APOBEC1P41238 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.24□□□□□ -1.89
APOBEC1P41238 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AC027514.1-201ENST00000588561 1603 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 Y_RNA.6-201ENST00000362350 114 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU6-1097P-201ENST00000363586 107 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU6-282P-201ENST00000365357 103 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU6-108P-201ENST00000365558 107 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU5E-6P-201ENST00000365574 115 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU6-1103P-201ENST00000384150 107 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU6-456P-201ENST00000384493 107 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 MIR554-201ENST00000384874 96 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU6-648P-201ENST00000410190 107 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU2-36P-201ENST00000410361 191 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 Y_RNA.599-201ENST00000410489 109 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RPL17P36-201ENST00000420302 549 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RAC1P6-201ENST00000423911 575 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 OR2AS1P-201ENST00000427827 319 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 MTND3P21-201ENST00000433774 331 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AL451074.3-201ENST00000437709 472 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC079781.2-201ENST00000446424 169 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.24□□□□□ -1.89
APOBEC1P41238 HMGN2P7-201ENST00000456186 273 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RPS20P20-201ENST00000460498 340 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 SRRM1P2-201ENST00000464531 1192 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU1-95P-201ENST00000516357 160 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU6-506P-201ENST00000516553 94 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 RNU1-128P-201ENST00000516704 160 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.24□□□□□ -1.89
APOBEC1P41238 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC016957.1-201ENST00000534895 309 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.24□□□□□ -1.89
APOBEC1P41238 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.24□□□□□ -1.89
APOBEC1P41238 GLUD1P4-201ENST00000590914 418 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AL021997.1-201ENST00000605757 193 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC004492.1-201ENST00000607036 742 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AC007684.1-201ENST00000609671 477 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 MIR7851-201ENST00000610611 160 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AL121772.2-201ENST00000614331 297 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC124864.2-201ENST00000624736 186 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
APOBEC1P41238 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.24□□□□□ -1.89
APOBEC1P41238 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
APOBEC1P41238 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
APOBEC1P41238 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.24□□□□□ -1.89
APOBEC1P41238 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
APOBEC1P41238 AL133383.2-201ENST00000622958 2336 ntBASIC3.24□□□□□ -1.89
APOBEC1P41238 AC007656.2-201ENST00000624902 4547 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC1P41238 MFSD8-233ENST00000641482 4860 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC1P41238 AC010733.2-201ENST00000589496 5702 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AC073343.1-201ENST00000328239 651 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC1P41238 SNORD9-201ENST00000362566 104 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AL359837.1-201ENST00000381357 287 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 Y_RNA.516-201ENST00000384541 124 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 MIR514A1-201ENST00000385133 98 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC1P41238 RNU4-55P-201ENST00000410731 137 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBEC1P41238 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBEC1P41238 RPS3AP44-201ENST00000425466 790 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 DPPA2P1-201ENST00000428060 556 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AL356867.1-201ENST00000429623 299 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AC002486.1-201ENST00000435098 391 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC1P41238 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC1P41238 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC1P41238 GAPDHP27-201ENST00000447427 1020 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 PSPHP1-201ENST00000450062 261 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 RN7SL594P-201ENST00000470590 287 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.23□□□□□ -1.89
APOBEC1P41238 RN7SL432P-201ENST00000484057 298 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AL049874.1-201ENST00000489560 388 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AC079382.1-201ENST00000493346 557 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 NDUFB4P9-201ENST00000511646 388 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC1P41238 SNORA70.16-201ENST00000516390 95 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 SCARNA24.1-201ENST00000516465 137 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 RNU6-1092P-201ENST00000516955 87 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 RNU6-410P-201ENST00000517006 107 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 RNU6-1220P-201ENST00000517126 108 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 RNU6-1231P-201ENST00000517185 103 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 HMGB1P41-201ENST00000520234 440 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC1P41238 FAM92A1P1-201ENST00000528023 890 ntBASIC3.23□□□□□ -1.89
APOBEC1P41238 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBEC1P41238 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC1P41238 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms