Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 DEFB131D-201ENST00000526803 184 ntBASIC2.57□□□□□ -2
RORAP35398 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.57□□□□□ -2
RORAP35398 CYCSP2-201ENST00000558168 301 ntBASIC2.57□□□□□ -2
RORAP35398 TMF1P1-201ENST00000576058 373 ntBASIC2.57□□□□□ -2
RORAP35398 AL590099.1-201ENST00000615276 138 ntBASIC2.57□□□□□ -2
RORAP35398 AC090772.4-201ENST00000623599 362 ntBASIC2.57□□□□□ -2
RORAP35398 AC135776.4-201ENST00000624300 1904 ntBASIC2.57□□□□□ -2
RORAP35398 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RORAP35398 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RORAP35398 AC012321.1-201ENST00000561622 1588 ntBASIC2.57□□□□□ -2
RORAP35398 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.56□□□□□ -2
RORAP35398 Y_RNA.192-201ENST00000363977 102 ntBASIC2.56□□□□□ -2
RORAP35398 MIR196B-201ENST00000384852 84 ntBASIC2.56□□□□□ -2
RORAP35398 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.56□□□□□ -2
RORAP35398 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.56□□□□□ -2
RORAP35398 TIMM9P2-201ENST00000419324 266 ntBASIC2.56□□□□□ -2
RORAP35398 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.56□□□□□ -2
RORAP35398 AL590383.1-201ENST00000428602 75 ntBASIC2.56□□□□□ -2
RORAP35398 AC090774.1-201ENST00000435925 246 ntBASIC2.56□□□□□ -2
RORAP35398 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.56□□□□□ -2
RORAP35398 RNU6-420P-201ENST00000458780 107 ntBASIC2.56□□□□□ -2
RORAP35398 snoU109.3-201ENST00000459477 145 ntBASIC2.56□□□□□ -2
RORAP35398 AC134050.1-201ENST00000495088 933 ntBASIC2.56□□□□□ -2
RORAP35398 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.56□□□□□ -2
RORAP35398 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.56□□□□□ -2
RORAP35398 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.56□□□□□ -2
RORAP35398 RNU6-528P-201ENST00000516926 100 ntBASIC2.56□□□□□ -2
RORAP35398 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.56□□□□□ -2
RORAP35398 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.56□□□□□ -2
RORAP35398 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.56□□□□□ -2
RORAP35398 AC090888.1-201ENST00000561335 1141 ntBASIC2.56□□□□□ -2
RORAP35398 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.56□□□□□ -2
RORAP35398 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.56□□□□□ -2
RORAP35398 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.56□□□□□ -2
RORAP35398 DUXAP3-201ENST00000603616 594 ntBASIC2.56□□□□□ -2
RORAP35398 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.56□□□□□ -2
RORAP35398 AC131235.4-201ENST00000609288 620 ntBASIC2.56□□□□□ -2
RORAP35398 AC090132.2-201ENST00000615881 347 ntBASIC2.56□□□□□ -2
RORAP35398 AC006213.4-201ENST00000616184 634 ntBASIC2.56□□□□□ -2
RORAP35398 AL357080.1-201ENST00000617394 239 ntBASIC2.56□□□□□ -2
RORAP35398 MIR6130-201ENST00000619419 109 ntBASIC2.56□□□□□ -2
RORAP35398 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.56□□□□□ -2
RORAP35398 AC010608.3-201ENST00000625048 527 ntBASIC2.56□□□□□ -2
RORAP35398 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RORAP35398 FTLP6-201ENST00000355274 422 ntBASIC2.55□□□□□ -2
RORAP35398 U3.12-201ENST00000364498 214 ntBASIC2.55□□□□□ -2
RORAP35398 SET-203ENST00000372688 801 ntTSL 2 BASIC2.55□□□□□ -2
RORAP35398 RNU6-1242P-201ENST00000391052 103 ntBASIC2.55□□□□□ -2
RORAP35398 AL356057.3-201ENST00000402607 340 ntBASIC2.55□□□□□ -2
RORAP35398 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.55□□□□□ -2
RORAP35398 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.55□□□□□ -2
RORAP35398 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.55□□□□□ -2
RORAP35398 AL354692.1-201ENST00000423044 315 ntBASIC2.55□□□□□ -2
RORAP35398 BX119904.4-201ENST00000424402 301 ntBASIC2.55□□□□□ -2
RORAP35398 OR4K11P-201ENST00000431829 904 ntBASIC2.55□□□□□ -2
RORAP35398 EEF1A1P39-201ENST00000440791 250 ntBASIC2.55□□□□□ -2
RORAP35398 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.55□□□□□ -2
RORAP35398 AC007327.1-201ENST00000447461 264 ntBASIC2.55□□□□□ -2
RORAP35398 RPS3P1-201ENST00000456781 192 ntBASIC2.55□□□□□ -2
RORAP35398 snoU13.8-201ENST00000458890 104 ntBASIC2.55□□□□□ -2
RORAP35398 AC087588.1-201ENST00000462203 316 ntBASIC2.55□□□□□ -2
RORAP35398 AC126389.1-201ENST00000477436 290 ntBASIC2.55□□□□□ -2
RORAP35398 RPL31P41-201ENST00000477967 372 ntBASIC2.55□□□□□ -2
RORAP35398 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.55□□□□□ -2
RORAP35398 MTCO1P9-201ENST00000505577 1534 ntBASIC2.55□□□□□ -2
RORAP35398 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.55□□□□□ -2
RORAP35398 AC079395.1-201ENST00000510981 262 ntBASIC2.55□□□□□ -2
RORAP35398 AC008716.1-201ENST00000511084 513 ntBASIC2.55□□□□□ -2
RORAP35398 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.55□□□□□ -2
RORAP35398 AL512347.1-201ENST00000566420 503 ntBASIC2.55□□□□□ -2
RORAP35398 AC010546.1-201ENST00000569391 485 ntBASIC2.55□□□□□ -2
RORAP35398 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.55□□□□□ -2
RORAP35398 MIR3908-201ENST00000579798 126 ntBASIC2.55□□□□□ -2
RORAP35398 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
RORAP35398 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.55□□□□□ -2
RORAP35398 AP001429.1-201ENST00000602568 530 ntBASIC2.55□□□□□ -2
RORAP35398 AC011451.2-201ENST00000604303 598 ntBASIC2.55□□□□□ -2
RORAP35398 AL391834.2-201ENST00000609982 546 ntBASIC2.55□□□□□ -2
RORAP35398 AC034102.8-201ENST00000615146 484 ntBASIC2.55□□□□□ -2
RORAP35398 AC002550.2-201ENST00000621246 394 ntBASIC2.55□□□□□ -2
RORAP35398 AC231657.1-201ENST00000624313 397 ntBASIC2.55□□□□□ -2
RORAP35398 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.55□□□□□ -2
RORAP35398 AL445984.1-201ENST00000637834 659 ntBASIC2.55□□□□□ -2
RORAP35398 AL359693.1-201ENST00000614959 2407 ntBASIC2.54□□□□□ -2
RORAP35398 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.54□□□□□ -2
RORAP35398 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
RORAP35398 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.54□□□□□ -2
RORAP35398 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.54□□□□□ -2
RORAP35398 AC005832.2-201ENST00000538921 1430 ntBASIC2.54□□□□□ -2
RORAP35398 ASNSP3-201ENST00000451989 1306 ntBASIC2.54□□□□□ -2
RORAP35398 RNU4-82P-201ENST00000362443 140 ntBASIC2.54□□□□□ -2
RORAP35398 RNU5A-1-201ENST00000362698 116 ntBASIC2.54□□□□□ -2
RORAP35398 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.54□□□□□ -2
RORAP35398 RNU6-76P-201ENST00000384060 104 ntBASIC2.54□□□□□ -2
RORAP35398 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.54□□□□□ -2
RORAP35398 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.54□□□□□ -2
RORAP35398 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.54□□□□□ -2
RORAP35398 MTND5P14-201ENST00000441481 1267 ntBASIC2.54□□□□□ -2
RORAP35398 AC002381.1-201ENST00000447049 280 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms