Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RPL17P12-201ENST00000413391 526 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 BX682237.1-201ENST00000415016 335 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
CTNNA1P35221 BTF3L4P3-201ENST00000418879 476 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNA1P35221 AC005326.1-201ENST00000429197 123 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
CTNNA1P35221 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNA1P35221 SNORA84-201ENST00000459229 133 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 AC010631.1-201ENST00000474150 156 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.15□□□□□ -1.91
CTNNA1P35221 AC105252.1-201ENST00000503089 286 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 RNU6-927P-201ENST00000516199 100 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNA1P35221 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 AC021171.1-201ENST00000603137 706 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 AC092953.2-201ENST00000608000 699 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 AL161734.1-201ENST00000609720 557 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 OR4G3P-201ENST00000633500 913 ntBASIC3.15□□□□□ -1.91
CTNNA1P35221 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTNNA1P35221 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTNNA1P35221 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNA1P35221 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNA1P35221 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNA1P35221 RNU6-931P-201ENST00000363850 107 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 SET-203ENST00000372688 801 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNA1P35221 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CTNNA1P35221 MIR449B-201ENST00000384995 97 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AL445669.1-201ENST00000426743 755 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNA1P35221 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC002456.2-201ENST00000509356 380 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC013828.2-201ENST00000532487 235 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 AC007115.1-201ENST00000546853 234 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 AC123904.3-201ENST00000547218 814 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 AC093012.1-202ENST00000549403 582 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNA1P35221 MIR7975-201ENST00000619350 68 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 AC034229.5-201ENST00000624258 185 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNA1P35221 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.14□□□□□ -1.91
CTNNA1P35221 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNA1P35221 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNA1P35221 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.13□□□□□ -1.91
CTNNA1P35221 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNA1P35221 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNA1P35221 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNA1P35221 Y_RNA.245-201ENST00000364493 95 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNA1P35221 SNORA54-201ENST00000384281 123 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 MIR887-201ENST00000401258 79 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AL356057.2-201ENST00000403318 432 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 SNORD88.1-201ENST00000408684 91 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 RNU2-49P-201ENST00000410666 184 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 HMGB1P49-201ENST00000418882 569 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 MTCO2P21-201ENST00000419780 677 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC092017.2-201ENST00000427600 362 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC244035.1-201ENST00000430042 390 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 AC010153.1-201ENST00000432862 727 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 RPS15AP7-201ENST00000439294 405 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 CR769776.1-201ENST00000441254 787 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.13□□□□□ -1.91
CTNNA1P35221 OR6K1P-201ENST00000456766 971 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 RPS29P20-201ENST00000489592 171 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 AC108043.1-201ENST00000512696 574 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 SNORA67.7-201ENST00000516664 135 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 DUXAP2-201ENST00000519198 589 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 MTCO2P15-201ENST00000532655 656 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.13□□□□□ -1.91
CTNNA1P35221 AL359212.1-201ENST00000556608 614 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AL157394.1-201ENST00000562983 1224 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 MIR5680-201ENST00000577577 84 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 AC090616.3-201ENST00000582184 217 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 MIR544B-201ENST00000582372 78 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 MIR3158-1-201ENST00000583596 81 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNA1P35221 BNIP3P39-201ENST00000601077 554 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC068790.3-201ENST00000602988 553 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC103710.1-201ENST00000610003 901 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms