Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RNA5SP503-201ENST00000517047 117 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 ERHP1-201ENST00000523006 310 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 CENPUP1-201ENST00000526649 1202 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.79□□□□□ -1.8
EPHA3P29320 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.79□□□□□ -1.8
EPHA3P29320 AC015917.1-201ENST00000579654 510 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
EPHA3P29320 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.79□□□□□ -1.8
EPHA3P29320 AC010928.3-201ENST00000587712 541 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC006116.10-201ENST00000591836 581 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.79□□□□□ -1.8
EPHA3P29320 AC020910.2-201ENST00000603635 610 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 DPPA3P3-201ENST00000603842 430 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC009994.1-201ENST00000606889 253 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 SDR42E1P2-201ENST00000614861 481 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 Y_RNA.804-201ENST00000615262 101 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC063943.3-201ENST00000615562 356 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC010133.1-201ENST00000615809 842 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC068831.8-201ENST00000620171 435 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC006504.8-201ENST00000621046 635 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC011155.2-201ENST00000623202 216 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.79□□□□□ -1.8
EPHA3P29320 U6.114-201ENST00000636407 96 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.79□□□□□ -1.8
EPHA3P29320 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
EPHA3P29320 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA3P29320 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA3P29320 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA3P29320 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
EPHA3P29320 AC092326.2-201ENST00000624772 1561 ntBASIC3.79□□□□□ -1.8
EPHA3P29320 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
EPHA3P29320 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.78□□□□□ -1.8
EPHA3P29320 AL354685.2-201ENST00000448218 1447 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
EPHA3P29320 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.78□□□□□ -1.8
EPHA3P29320 LARP1BP1-201ENST00000506036 1359 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EPHA3P29320 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.78□□□□□ -1.8
EPHA3P29320 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
EPHA3P29320 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
EPHA3P29320 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.78□□□□□ -1.8
EPHA3P29320 ASNSP3-201ENST00000451989 1306 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.78□□□□□ -1.8
EPHA3P29320 MIR383-201ENST00000362257 73 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 RNU6-946P-201ENST00000383878 107 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
EPHA3P29320 RAP1BP3-201ENST00000407180 549 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 RPL21P109-201ENST00000422213 475 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 RPL36AP53-201ENST00000432891 316 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.78□□□□□ -1.8
EPHA3P29320 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.78□□□□□ -1.8
EPHA3P29320 AL118520.1-201ENST00000450770 291 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.78□□□□□ -1.8
EPHA3P29320 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 RN7SL303P-201ENST00000469773 251 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 MTCO2P30-201ENST00000503662 364 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EPHA3P29320 AC108078.2-201ENST00000510750 236 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 AC114781.4-201ENST00000513707 639 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 GMPSP1-201ENST00000514075 579 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 SNORD60.2-201ENST00000516883 86 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.78□□□□□ -1.8
EPHA3P29320 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 AP005435.4-201ENST00000529514 284 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 AC009643.1-201ENST00000532030 391 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.78□□□□□ -1.8
EPHA3P29320 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.78□□□□□ -1.8
EPHA3P29320 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.78□□□□□ -1.8
EPHA3P29320 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.78□□□□□ -1.8
EPHA3P29320 AC068790.4-201ENST00000602474 263 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.78□□□□□ -1.8
EPHA3P29320 AC104260.1-201ENST00000616660 539 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
EPHA3P29320 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
EPHA3P29320 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
EPHA3P29320 AC004972.1-201ENST00000623934 2209 ntBASIC3.78□□□□□ -1.8
EPHA3P29320 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.78□□□□□ -1.81
EPHA3P29320 OR4G1P-203ENST00000641984 1631 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
EPHA3P29320 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
EPHA3P29320 XIAPP3-201ENST00000312918 795 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.77□□□□□ -1.81
EPHA3P29320 RNU6-552P-201ENST00000362869 119 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 RNU6-173P-201ENST00000364215 104 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 RNA5SP509-201ENST00000364577 119 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 SNORD115-7-201ENST00000365306 82 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
EPHA3P29320 SNORA36C-201ENST00000384289 132 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 Y_RNA.576-201ENST00000384781 102 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 RNU6-903P-201ENST00000391270 109 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 SOD2P1-201ENST00000396543 562 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 RNA5SP118-201ENST00000410385 109 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 RPL23AP26-201ENST00000412728 464 ntBASIC3.77□□□□□ -1.81
EPHA3P29320 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms