Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ERCC3P19447 RNU6-1167P-201ENST00000363227 94 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 SNORA16.2-201ENST00000390991 127 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 EIF4E2P1-201ENST00000393781 255 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 RNA5SP129-201ENST00000410276 118 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AL160275.2-201ENST00000412010 394 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AC009237.10-201ENST00000414112 510 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 RPL21P90-201ENST00000415692 466 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 NCOR1P3-201ENST00000420479 303 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 CYP4F29P-201ENST00000420685 446 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 MTND1P14-201ENST00000427400 950 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AC004938.1-201ENST00000438468 308 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC3P19447 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC3P19447 NUTF2P3-201ENST00000448540 384 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.25□□□□□ -1.57
ERCC3P19447 DYNLL1P5-201ENST00000467158 270 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 RPL7P5-201ENST00000471472 736 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 RN7SL810P-201ENST00000493031 276 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 SNORA19.2-201ENST00000516013 114 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 SNORA70.16-201ENST00000516390 95 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 CYCSP29-201ENST00000533731 318 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.25□□□□□ -1.57
ERCC3P19447 AC006270.2-201ENST00000578523 652 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 MIR4719-201ENST00000585233 84 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AC107294.1-201ENST00000609524 467 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 AL445567.2-201ENST00000618935 498 ntBASIC5.25□□□□□ -1.57
ERCC3P19447 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ERCC3P19447 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC3P19447 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ERCC3P19447 Y_RNA.813-201ENST00000364639 102 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 Y_RNA.384-201ENST00000383909 102 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 Y_RNA.509-201ENST00000384506 99 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AL592291.1-201ENST00000403830 352 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AP000580.1-201ENST00000404439 358 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 U3.35-201ENST00000408405 208 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 RN7SKP263-201ENST00000411194 309 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AC063979.1-201ENST00000415539 377 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC3P19447 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.24□□□□□ -1.57
ERCC3P19447 HSPD1P21-201ENST00000436541 245 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC3P19447 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC3P19447 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.24□□□□□ -1.57
ERCC3P19447 Y_RNA.682-201ENST00000516457 100 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC3P19447 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC3P19447 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.24□□□□□ -1.57
ERCC3P19447 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.24□□□□□ -1.57
ERCC3P19447 AC074050.1-201ENST00000563247 211 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 MIR5692A1-201ENST00000580523 69 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AC053481.4-201ENST00000583164 216 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 MIR3942-201ENST00000585264 109 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.24□□□□□ -1.57
ERCC3P19447 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.24□□□□□ -1.57
ERCC3P19447 AC098826.3-201ENST00000603823 466 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AL353621.2-201ENST00000605340 133 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 AC091979.2-201ENST00000607514 214 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 Xist_exon1.1-201ENST00000618930 85 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.24□□□□□ -1.57
ERCC3P19447 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
ERCC3P19447 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.24□□□□□ -1.57
ERCC3P19447 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERCC3P19447 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.24□□□□□ -1.57
ERCC3P19447 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC3P19447 AC006026.1-201ENST00000444025 1803 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ERCC3P19447 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC3P19447 SNORA70C-201ENST00000384538 135 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 SNORA57.1-201ENST00000391227 145 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 SDHCP2-201ENST00000398565 501 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ERCC3P19447 RNU2-71P-201ENST00000411395 189 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 AC011933.1-201ENST00000413334 321 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 RPL21P109-201ENST00000422213 475 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.23□□□□□ -1.57
ERCC3P19447 NDUFA5P4-201ENST00000436704 385 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC3P19447 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.23□□□□□ -1.57
ERCC3P19447 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC3P19447 AC020593.1-201ENST00000507399 299 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC3P19447 FGF7P4-201ENST00000509595 295 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 RNA5SP290-201ENST00000517133 127 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 RNA5SP291-201ENST00000517222 105 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 AC090136.1-201ENST00000520009 240 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC3P19447 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.23□□□□□ -1.57
ERCC3P19447 MIR1254-2-201ENST00000579553 63 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 AL022345.1-201ENST00000607292 135 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 SNX18P1Y-201ENST00000616231 511 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC3P19447 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.23□□□□□ -1.57
ERCC3P19447 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.23□□□□□ -1.57
ERCC3P19447 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC3P19447 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ERCC3P19447 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.22□□□□□ -1.57
ERCC3P19447 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ERCC3P19447 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms