Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC068620.4-201ENST00000636730 1182 ntBASIC1.88□□□□□ -2.11
TOP2AP11388 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
TOP2AP11388 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TOP2AP11388 AC111188.2-201ENST00000529697 1387 ntBASIC1.88□□□□□ -2.11
TOP2AP11388 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TOP2AP11388 RNU4-38P-201ENST00000364472 129 ntBASIC1.87□□□□□ -2.11
TOP2AP11388 AL121601.2-201ENST00000438019 707 ntBASIC1.87□□□□□ -2.11
TOP2AP11388 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP2AP11388 AC007395.1-201ENST00000451333 677 ntBASIC1.87□□□□□ -2.11
TOP2AP11388 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP2AP11388 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.87□□□□□ -2.11
TOP2AP11388 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TOP2AP11388 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.87□□□□□ -2.11
TOP2AP11388 KLRA1P-201ENST00000503499 986 ntBASIC1.86□□□□□ -2.11
TOP2AP11388 MIR449C-201ENST00000516047 92 ntBASIC1.86□□□□□ -2.11
TOP2AP11388 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.86□□□□□ -2.11
TOP2AP11388 MIR4285-201ENST00000581001 85 ntBASIC1.86□□□□□ -2.11
TOP2AP11388 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.86□□□□□ -2.11
TOP2AP11388 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.86□□□□□ -2.11
TOP2AP11388 ZNF90P2-204ENST00000419323 1075 ntBASIC1.86□□□□□ -2.11
TOP2AP11388 AL591704.2-201ENST00000421658 181 ntBASIC1.86□□□□□ -2.11
TOP2AP11388 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.86□□□□□ -2.11
TOP2AP11388 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.86□□□□□ -2.11
TOP2AP11388 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.86□□□□□ -2.11
TOP2AP11388 AC009090.3-201ENST00000616553 565 ntBASIC1.86□□□□□ -2.11
TOP2AP11388 MIR1285-1-201ENST00000408593 84 ntBASIC1.85□□□□□ -2.11
TOP2AP11388 SGO1P2-201ENST00000429458 1589 ntBASIC1.85□□□□□ -2.11
TOP2AP11388 HMGN2P16-201ENST00000456802 261 ntBASIC1.85□□□□□ -2.11
TOP2AP11388 AP005597.4-201ENST00000526762 229 ntBASIC1.85□□□□□ -2.11
TOP2AP11388 NBEAP1-201ENST00000554452 979 ntBASIC1.85□□□□□ -2.11
TOP2AP11388 AC007275.1-201ENST00000621243 671 ntBASIC1.85□□□□□ -2.11
TOP2AP11388 RNU1-133P-201ENST00000364867 167 ntBASIC1.84□□□□□ -2.11
TOP2AP11388 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.84□□□□□ -2.11
TOP2AP11388 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
TOP2AP11388 COX6CP18-201ENST00000448769 222 ntBASIC1.84□□□□□ -2.11
TOP2AP11388 HMGB3P17-201ENST00000504195 649 ntBASIC1.84□□□□□ -2.11
TOP2AP11388 SNORA31.16-201ENST00000516773 139 ntBASIC1.84□□□□□ -2.11
TOP2AP11388 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.84□□□□□ -2.11
TOP2AP11388 MIR5000-201ENST00000577717 103 ntBASIC1.84□□□□□ -2.11
TOP2AP11388 MIR4295-201ENST00000585286 85 ntBASIC1.84□□□□□ -2.11
TOP2AP11388 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.84□□□□□ -2.11
TOP2AP11388 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.83□□□□□ -2.12
TOP2AP11388 MIR532-201ENST00000385025 91 ntBASIC1.83□□□□□ -2.12
TOP2AP11388 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TOP2AP11388 AC015922.2-201ENST00000435593 184 ntBASIC1.83□□□□□ -2.12
TOP2AP11388 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
TOP2AP11388 AC104685.1-201ENST00000502445 371 ntBASIC1.83□□□□□ -2.12
TOP2AP11388 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.83□□□□□ -2.12
TOP2AP11388 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.83□□□□□ -2.12
TOP2AP11388 AC083923.1-201ENST00000523708 376 ntBASIC1.83□□□□□ -2.12
TOP2AP11388 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.83□□□□□ -2.12
TOP2AP11388 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.83□□□□□ -2.12
TOP2AP11388 MTND4P27-201ENST00000450813 1354 ntBASIC1.83□□□□□ -2.12
TOP2AP11388 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TOP2AP11388 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.82□□□□□ -2.12
TOP2AP11388 CD24P4-201ENST00000382840 243 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 RNA5SP465-201ENST00000391195 109 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 RNA5SP38-201ENST00000410750 119 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 OR51A5P-201ENST00000415429 942 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 PGBD4P6-201ENST00000421501 610 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 RPS27P1-201ENST00000450552 247 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP2AP11388 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.82□□□□□ -2.12
TOP2AP11388 CYCSP26-201ENST00000534107 320 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP2AP11388 AP003117.1-201ENST00000602771 554 ntBASIC1.82□□□□□ -2.12
TOP2AP11388 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TOP2AP11388 RNU4-72P-201ENST00000410754 173 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.81□□□□□ -2.12
TOP2AP11388 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.81□□□□□ -2.12
TOP2AP11388 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.81□□□□□ -2.12
TOP2AP11388 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.81□□□□□ -2.12
TOP2AP11388 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.81□□□□□ -2.12
TOP2AP11388 RPL21P134-201ENST00000453468 483 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 LTV1P1-201ENST00000510683 1237 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.81□□□□□ -2.12
TOP2AP11388 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.81□□□□□ -2.12
TOP2AP11388 AL731537.2-201ENST00000561565 951 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC010200.2-201ENST00000605098 235 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC108706.1-201ENST00000611053 297 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 MIR7973-1-201ENST00000614683 76 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.81□□□□□ -2.12
TOP2AP11388 AC073592.7-201ENST00000623659 507 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TOP2AP11388 AL390862.1-201ENST00000635467 1469 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 RPS20P15-201ENST00000412792 311 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.81□□□□□ -2.12
TOP2AP11388 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.81□□□□□ -2.12
TOP2AP11388 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TOP2AP11388 SDCBPP1-201ENST00000440192 890 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 MTND3P6-201ENST00000485242 339 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC114322.1-201ENST00000506771 926 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.81□□□□□ -2.12
TOP2AP11388 AC233266.2-201ENST00000567067 528 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 MIR3690-201ENST00000580266 75 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 AC211469.2-201ENST00000605461 205 ntBASIC1.81□□□□□ -2.12
TOP2AP11388 MIR513A1-201ENST00000385138 129 ntBASIC1.8□□□□□ -2.12
TOP2AP11388 AIMP1P2-201ENST00000425294 312 ntBASIC1.8□□□□□ -2.12
TOP2AP11388 RNA5SP384-201ENST00000516615 116 ntBASIC1.8□□□□□ -2.12
TOP2AP11388 AL133507.1-201ENST00000605269 557 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms