Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 MTND1P8-201ENST00000571424 950 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC022662.1-201ENST00000580252 331 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 ELOCP29-201ENST00000588193 334 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC245884.10-201ENST00000597355 337 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 ATP1B3P1-201ENST00000605365 821 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 AL078595.3-201ENST00000623815 1166 ntBASIC2.29□□□□□ -2.04
HLA-DPB1P04440 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DPB1P04440 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU6-525P-201ENST00000363685 104 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU6-270P-201ENST00000364131 105 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU6-359P-201ENST00000365466 108 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU6-744P-201ENST00000365557 107 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU1-39P-201ENST00000383897 165 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU6-1316P-201ENST00000384242 108 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU6-114P-201ENST00000384704 105 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 MIR514A1-201ENST00000385133 98 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AL356421.1-201ENST00000403255 413 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 RNU2-52P-201ENST00000410680 190 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 USP9YP20-201ENST00000419224 558 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 MTND3P1-201ENST00000441336 220 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 DUXAP8-207ENST00000456786 622 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 FAM172BP-201ENST00000487497 1089 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 NBEAP1-201ENST00000554452 979 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC106782.4-201ENST00000568264 210 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC011471.1-201ENST00000585766 187 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 GLUD1P4-201ENST00000590914 418 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AL158042.1-201ENST00000605338 460 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC090186.1-201ENST00000605991 572 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AL138880.2-201ENST00000616214 239 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 SNHG22-203ENST00000617833 660 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC013470.4-201ENST00000619978 986 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AP000484.1-201ENST00000620067 1252 ntBASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DPB1P04440 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
HLA-DPB1P04440 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC005832.2-201ENST00000538921 1430 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AP000526.1-201ENST00000603308 1388 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RNU6-1078P-201ENST00000364522 103 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 NDUFB4P4-201ENST00000404822 243 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AL162578.1-201ENST00000406202 378 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RNU6-757P-201ENST00000410334 100 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 SSR1P2-201ENST00000415208 787 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC018630.2-202ENST00000422992 927 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 NDUFB4P7-201ENST00000423198 363 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 TXNL1P1-201ENST00000429528 554 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 TAAR7P-201ENST00000436141 242 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 MTCO1P27-201ENST00000448269 226 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 USP9YP10-201ENST00000454868 628 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 SNORD109B-201ENST00000458961 67 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 SNORD109A-201ENST00000459128 67 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RPL7P18-201ENST00000478965 734 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 LARP1BP2-201ENST00000486594 519 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RPL30P5-201ENST00000494923 336 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC024589.1-201ENST00000512207 263 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC034159.1-201ENST00000513885 583 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RNA5SP282-201ENST00000516355 108 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RNU6-1256P-201ENST00000516539 103 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RNU6-928P-201ENST00000516876 104 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 MIR3609-201ENST00000582661 80 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms