Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTND4LP13-201ENST00000425022 298 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 XKRYP6-201ENST00000440468 1116 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 XKRYP3-201ENST00000442113 1116 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 HSFY3P-201ENST00000444242 1191 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.14□□□□□ -2.23
SPTA1P02549 AC007115.1-201ENST00000546853 234 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.14□□□□□ -2.23
SPTA1P02549 GLUD1P4-201ENST00000590914 418 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SPTA1P02549 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.14□□□□□ -2.23
SPTA1P02549 CFTRP2-201ENST00000634304 199 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.14□□□□□ -2.23
SPTA1P02549 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SPTA1P02549 Y_RNA.167-201ENST00000363735 109 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 SNORD48-201ENST00000364953 64 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 Y_RNA.549-201ENST00000384657 102 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 HSPE1P26-201ENST00000405341 275 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 RNA5SP492-201ENST00000411330 114 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 AC073464.3-201ENST00000422564 712 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.14□□□□□ -2.23
SPTA1P02549 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.14□□□□□ -2.23
SPTA1P02549 RNA5SP82-201ENST00000516707 92 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SPTA1P02549 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SPTA1P02549 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 AC007742.2-201ENST00000618226 398 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 MIR6513-201ENST00000621188 64 ntBASIC1.14□□□□□ -2.23
SPTA1P02549 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.13□□□□□ -2.23
SPTA1P02549 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.13□□□□□ -2.23
SPTA1P02549 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.13□□□□□ -2.23
SPTA1P02549 MTND4P12-201ENST00000498999 1377 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 AC123912.3-201ENST00000600907 1367 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SPTA1P02549 RNU6-105P-201ENST00000363909 104 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 AL512504.1-201ENST00000415494 778 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 Z85995.1-201ENST00000415547 335 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 ZNF965P-201ENST00000432501 817 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 AC090774.1-201ENST00000435925 246 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 UBE2V1P13-201ENST00000436983 439 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.13□□□□□ -2.23
SPTA1P02549 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.13□□□□□ -2.23
SPTA1P02549 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SPTA1P02549 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SPTA1P02549 AC114546.3-201ENST00000623582 1734 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SPTA1P02549 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SPTA1P02549 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SPTA1P02549 AC104308.1-201ENST00000454621 333 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 AC104472.2-201ENST00000469035 601 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.13□□□□□ -2.23
SPTA1P02549 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.13□□□□□ -2.23
SPTA1P02549 AC112503.2-201ENST00000609005 552 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 AC116447.1-201ENST00000613153 453 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.13□□□□□ -2.23
SPTA1P02549 MIR338-201ENST00000636369 67 ntBASIC1.13□□□□□ -2.23
SPTA1P02549 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
SPTA1P02549 AC109780.2-201ENST00000413467 845 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.12□□□□□ -2.23
SPTA1P02549 RPL7P31-201ENST00000450192 724 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 RNU7-157P-201ENST00000459600 66 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.12□□□□□ -2.23
SPTA1P02549 AC012170.1-201ENST00000495139 359 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 AC005912.1-201ENST00000495392 255 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.12□□□□□ -2.23
SPTA1P02549 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.12□□□□□ -2.23
SPTA1P02549 NOP56P3-201ENST00000549457 385 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.12□□□□□ -2.23
SPTA1P02549 DUXAP11-201ENST00000603858 526 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 AC130650.2-201ENST00000618736 2403 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 CENPCP1-201ENST00000533085 2578 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SPTA1P02549 RNF6P1-201ENST00000444889 1784 ntBASIC1.12□□□□□ -2.23
SPTA1P02549 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.12□□□□□ -2.23
SPTA1P02549 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
SPTA1P02549 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.12□□□□□ -2.23
SPTA1P02549 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SPTA1P02549 RNU4-52P-201ENST00000384209 138 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 RPL35AP22-201ENST00000436855 335 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.11□□□□□ -2.23
SPTA1P02549 MTATP6P22-201ENST00000507369 598 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 RN7SKP265-201ENST00000516448 223 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 AC090821.2-201ENST00000523552 176 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 EEF1B2P4-201ENST00000551398 348 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.11□□□□□ -2.23
SPTA1P02549 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
SPTA1P02549 MIR4446-201ENST00000578505 67 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 AC097504.2-201ENST00000608088 454 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 AP000254.1-201ENST00000609934 520 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTA1P02549 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.11□□□□□ -2.23
SPTA1P02549 AC018630.2-201ENST00000534866 2403 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 AC011477.1-204ENST00000623416 1325 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 MTND5P10-201ENST00000603719 1809 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 ANAPC10P1-201ENST00000395991 556 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 SNRPEP2-201ENST00000397592 279 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 CYCSP33-201ENST00000414485 327 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.11□□□□□ -2.23
SPTA1P02549 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms