Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.12□□□□□ -1.75
COL3A1P02461 AP003122.4-201ENST00000530980 758 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 SLC2A13P1-201ENST00000531560 322 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC008127.2-201ENST00000549925 1075 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 RPL21P5-201ENST00000554662 472 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.12□□□□□ -1.75
COL3A1P02461 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.12□□□□□ -1.75
COL3A1P02461 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.12□□□□□ -1.75
COL3A1P02461 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.12□□□□□ -1.75
COL3A1P02461 AC116312.1-201ENST00000606841 314 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AL122125.1-201ENST00000616999 600 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC006504.8-201ENST00000621046 635 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC139792.3-201ENST00000623525 224 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC231657.1-201ENST00000624313 397 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC091903.1-201ENST00000624322 454 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC108206.1-201ENST00000570186 4159 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 AC107027.3-201ENST00000565095 3473 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL3A1P02461 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
COL3A1P02461 AC004944.1-201ENST00000517807 3059 ntBASIC4.12□□□□□ -1.75
COL3A1P02461 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
COL3A1P02461 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.12□□□□□ -1.75
COL3A1P02461 SNORD81.2-201ENST00000365153 76 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 UBA52P6-201ENST00000399822 382 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL3A1P02461 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.11□□□□□ -1.75
COL3A1P02461 AL953862.1-201ENST00000423016 168 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC006028.1-201ENST00000438379 402 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC108734.1-201ENST00000439549 399 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC006539.3-201ENST00000454258 129 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 FAM172BP-201ENST00000487497 1089 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 RPL7P23-201ENST00000493874 747 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 RFPL4AP5-201ENST00000514977 504 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.11□□□□□ -1.75
COL3A1P02461 DEFB131D-201ENST00000526803 184 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC068587.4-201ENST00000533893 186 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC107954.1-201ENST00000565906 727 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC034268.2-201ENST00000571784 482 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 FAM106CP-201ENST00000582212 507 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC007687.1-201ENST00000602704 304 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC245014.2-201ENST00000603689 287 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC246785.4-201ENST00000605374 287 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC010205.1-201ENST00000616668 449 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 YWHAEP7-203ENST00000622054 312 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
COL3A1P02461 GABRG2-229ENST00000641017 3628 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
COL3A1P02461 LINC01355-201ENST00000566551 5444 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
COL3A1P02461 MTCO1P14-201ENST00000441695 1559 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 Y_RNA.25-201ENST00000362528 102 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 Y_RNA.58-201ENST00000362807 102 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 Y_RNA.154-201ENST00000363624 102 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 RNY3P1-201ENST00000365085 102 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 RNY3-201ENST00000365484 102 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 RNU6-533P-201ENST00000384144 107 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 Y_RNA.490-201ENST00000384413 102 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 U3.26-201ENST00000391236 204 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 RNA5SP296-201ENST00000410523 111 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.11□□□□□ -1.75
COL3A1P02461 AL365400.1-201ENST00000431854 640 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.11□□□□□ -1.75
COL3A1P02461 Z82190.1-201ENST00000454534 490 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 S100A11P2-201ENST00000467589 312 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.11□□□□□ -1.75
COL3A1P02461 SNORA19.2-201ENST00000516013 114 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC093027.1-201ENST00000546698 429 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC018638.8-201ENST00000588755 281 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 BNIP3P23-201ENST00000599655 511 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC243960.4-201ENST00000600532 288 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.11□□□□□ -1.75
COL3A1P02461 AC119674.1-212ENST00000641155 993 ntBASIC4.11□□□□□ -1.75
COL3A1P02461 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
COL3A1P02461 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.1□□□□□ -1.75
COL3A1P02461 AC020633.1-201ENST00000468439 2247 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL3A1P02461 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL3A1P02461 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.1□□□□□ -1.75
COL3A1P02461 RNU6-216P-201ENST00000363282 104 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 SNORD56.3-201ENST00000363507 71 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 RNU6-1322P-201ENST00000364309 107 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 RNU6-98P-201ENST00000384173 107 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 SNORA51.12-201ENST00000384448 134 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 RNU6-738P-201ENST00000384531 106 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 MIR606-201ENST00000384851 96 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AL138878.1-201ENST00000405131 347 ntBASIC4.1□□□□□ -1.75
COL3A1P02461 AL356432.1-201ENST00000405809 419 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms