Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 RPL21P17-201ENST00000397467 475 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 RN7SKP53-201ENST00000411337 315 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 MED13P1-201ENST00000428342 171 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-2O95096 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-2O95096 DNAJC19P4-201ENST00000440115 345 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 RPS29P31-201ENST00000446147 164 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 C1DP4-201ENST00000455429 424 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 TTC39CP1-201ENST00000512513 755 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 MTND4LP31-201ENST00000514859 294 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 RNU2-27P-201ENST00000516185 142 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 SCARNA24.1-201ENST00000516465 137 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 DUXAP2-201ENST00000519198 589 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 OR5G4P-201ENST00000525251 760 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 RPL21P12-201ENST00000559810 515 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX2-2O95096 AC067852.3-201ENST00000589177 561 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AL136363.1-201ENST00000605349 337 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AC015540.1-201ENST00000615828 501 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.31□□□□□ -1.88
NKX2-2O95096 AC068880.5-201ENST00000624331 290 ntBASIC3.31□□□□□ -1.88
NKX2-2O95096 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX2-2O95096 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NKX2-2O95096 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-2O95096 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX2-2O95096 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NKX2-2O95096 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-2O95096 MTND5P26-201ENST00000426018 1752 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-2O95096 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
NKX2-2O95096 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NKX2-2O95096 Y_RNA.22-201ENST00000362492 102 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 RNU1-64P-201ENST00000365443 163 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 RNU6-108P-201ENST00000365558 107 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 RNU6-741P-201ENST00000383889 107 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 RNU6-259P-201ENST00000383999 107 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 RNU6-701P-201ENST00000384059 107 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX2-2O95096 AL358934.1-201ENST00000432346 324 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 RPL36AP6-201ENST00000435770 321 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-2O95096 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX2-2O95096 AC013267.1-201ENST00000458227 267 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AC087588.1-201ENST00000462203 316 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 RN7SL594P-201ENST00000470590 287 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AC011825.1-201ENST00000484967 388 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AL358832.1-201ENST00000497800 389 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX2-2O95096 HMGB1P41-201ENST00000520234 440 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX2-2O95096 CASP1P1-201ENST00000526345 212 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AC022690.1-201ENST00000526681 550 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX2-2O95096 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX2-2O95096 AL845331.3-202ENST00000562856 261 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX2-2O95096 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-2O95096 AC002545.1-201ENST00000592511 181 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX2-2O95096 AC084782.3-201ENST00000612282 578 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 AL121772.2-201ENST00000614331 297 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX2-2O95096 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-2O95096 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-2O95096 MFSD8-236ENST00000641509 4050 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
NKX2-2O95096 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC007785.2-201ENST00000598627 1916 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC073343.1-201ENST00000328239 651 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RNU6-181P-201ENST00000363225 107 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RNU6-282P-201ENST00000365357 103 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 SMIM11P1-201ENST00000369586 178 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RNU6-1103P-201ENST00000384150 107 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 Y_RNA.517-201ENST00000384551 106 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RNU2-33P-201ENST00000410344 192 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RN7SKP202-201ENST00000410439 330 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-2O95096 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 TMEM167AP1-201ENST00000423409 219 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-2O95096 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 GPR143P-201ENST00000434155 205 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 AC007389.2-201ENST00000434630 306 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms