Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MAPK10-373ENST00000641983 6772 ntBASIC3.2□□□□□ -1.9
PRKNO60260 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PRKNO60260 AL138713.1-201ENST00000624026 2130 ntBASIC3.19□□□□□ -1.9
PRKNO60260 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.19□□□□□ -1.9
PRKNO60260 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRKNO60260 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRKNO60260 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PRKNO60260 RNU6-1155P-201ENST00000363554 107 ntBASIC3.19□□□□□ -1.9
PRKNO60260 SNORD46.1-201ENST00000364139 104 ntBASIC3.19□□□□□ -1.9
PRKNO60260 RNU1-33P-201ENST00000364249 162 ntBASIC3.19□□□□□ -1.9
PRKNO60260 Y_RNA.372-201ENST00000365599 102 ntBASIC3.19□□□□□ -1.9
PRKNO60260 MIR135A2-201ENST00000384854 100 ntBASIC3.19□□□□□ -1.9
PRKNO60260 MIR181A1-201ENST00000385026 110 ntBASIC3.19□□□□□ -1.9
PRKNO60260 MTCO3P40-201ENST00000392516 676 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 SSXP9-201ENST00000417503 292 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.19□□□□□ -1.9
PRKNO60260 BEND7P1-201ENST00000422058 457 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.19□□□□□ -1.9
PRKNO60260 MTCO2P11-201ENST00000431069 680 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC002486.1-201ENST00000435098 391 ntBASIC3.19□□□□□ -1.9
PRKNO60260 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.19□□□□□ -1.9
PRKNO60260 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.19□□□□□ -1.9
PRKNO60260 UBE2V1P8-201ENST00000437166 265 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PRKNO60260 AL136380.1-201ENST00000447970 162 ntBASIC3.19□□□□□ -1.9
PRKNO60260 MTND1P12-201ENST00000455231 147 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC108059.3-201ENST00000456388 214 ntBASIC3.19□□□□□ -1.9
PRKNO60260 CEACAMP4-201ENST00000457676 421 ntBASIC3.19□□□□□ -1.9
PRKNO60260 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC092451.1-201ENST00000480211 153 ntBASIC3.19□□□□□ -1.9
PRKNO60260 RPL31P13-201ENST00000484151 370 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC007182.2-201ENST00000489251 402 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC026784.1-201ENST00000507986 352 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC114797.1-201ENST00000514003 728 ntBASIC3.19□□□□□ -1.9
PRKNO60260 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 RNU2-27P-201ENST00000516185 142 ntBASIC3.19□□□□□ -1.9
PRKNO60260 RNU2-58P-201ENST00000516403 183 ntBASIC3.19□□□□□ -1.9
PRKNO60260 MIR2114-201ENST00000516645 80 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 AC103783.1-201ENST00000520506 373 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC022616.3-201ENST00000523940 148 ntBASIC3.19□□□□□ -1.9
PRKNO60260 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.19□□□□□ -1.9
PRKNO60260 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PRKNO60260 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.19□□□□□ -1.9
PRKNO60260 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.19□□□□□ -1.9
PRKNO60260 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 AL121603.1-201ENST00000553815 142 ntBASIC3.19□□□□□ -1.9
PRKNO60260 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.19□□□□□ -1.9
PRKNO60260 MIR4801-201ENST00000582704 82 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.19□□□□□ -1.9
PRKNO60260 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.19□□□□□ -1.9
PRKNO60260 SRGNP1-201ENST00000603392 451 ntBASIC3.19□□□□□ -1.9
PRKNO60260 RBM11P1-201ENST00000604951 799 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AL136363.1-201ENST00000605349 337 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC092954.2-201ENST00000609103 430 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC012531.5-201ENST00000611375 151 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.19□□□□□ -1.9
PRKNO60260 uc_338.12-201ENST00000616344 181 ntBASIC3.19□□□□□ -1.9
PRKNO60260 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
PRKNO60260 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRKNO60260 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.19□□□□□ -1.9
PRKNO60260 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PRKNO60260 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
PRKNO60260 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.19□□□□□ -1.9
PRKNO60260 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PRKNO60260 ELF2P3-201ENST00000445099 1506 ntBASIC3.19□□□□□ -1.9
PRKNO60260 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PRKNO60260 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 OR1S2-201ENST00000302592 978 ntBASIC3.18□□□□□ -1.9
PRKNO60260 Y_RNA.1-201ENST00000352915 104 ntBASIC3.18□□□□□ -1.9
PRKNO60260 RNY1P12-201ENST00000364251 105 ntBASIC3.18□□□□□ -1.9
PRKNO60260 RNU4-12P-201ENST00000365233 139 ntBASIC3.18□□□□□ -1.9
PRKNO60260 SNORD6-201ENST00000365444 73 ntBASIC3.18□□□□□ -1.9
PRKNO60260 Y_RNA.409-201ENST00000383990 98 ntBASIC3.18□□□□□ -1.9
PRKNO60260 RNU6-637P-201ENST00000384050 107 ntBASIC3.18□□□□□ -1.9
PRKNO60260 RNU6-432P-201ENST00000384196 109 ntBASIC3.18□□□□□ -1.9
PRKNO60260 RNU6-278P-201ENST00000390945 109 ntBASIC3.18□□□□□ -1.9
PRKNO60260 CALM2P3-201ENST00000400429 449 ntBASIC3.18□□□□□ -1.9
PRKNO60260 BTF3P7-201ENST00000407097 488 ntBASIC3.18□□□□□ -1.9
PRKNO60260 MTND1P21-201ENST00000412991 285 ntBASIC3.18□□□□□ -1.9
PRKNO60260 EI24P1-201ENST00000416584 867 ntBASIC3.18□□□□□ -1.9
PRKNO60260 MTND1P23-201ENST00000416931 372 ntBASIC3.18□□□□□ -1.9
PRKNO60260 CCDC58P2-201ENST00000417131 366 ntBASIC3.18□□□□□ -1.9
PRKNO60260 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PRKNO60260 AC002075.2-201ENST00000425207 252 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AC017083.1-201ENST00000428093 483 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AL139415.2-201ENST00000431968 163 ntBASIC3.18□□□□□ -1.9
PRKNO60260 RPS29P31-201ENST00000446147 164 ntBASIC3.18□□□□□ -1.9
PRKNO60260 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.18□□□□□ -1.9
PRKNO60260 AC132479.1-201ENST00000449160 144 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms