Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CYCSP4-201ENST00000429682 331 ntBASIC3.54□□□□□ -1.84
LDB2O43679 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB2O43679 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.54□□□□□ -1.84
LDB2O43679 HSPD1P21-201ENST00000436541 245 ntBASIC3.54□□□□□ -1.84
LDB2O43679 RPL23AP20-201ENST00000447965 421 ntBASIC3.54□□□□□ -1.84
LDB2O43679 PRSS3P4-201ENST00000453323 162 ntBASIC3.54□□□□□ -1.84
LDB2O43679 SNORD105B-201ENST00000458770 79 ntBASIC3.54□□□□□ -1.84
LDB2O43679 RNU7-59P-201ENST00000459101 61 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AC078817.1-201ENST00000492623 435 ntBASIC3.54□□□□□ -1.84
LDB2O43679 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LDB2O43679 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB2O43679 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.54□□□□□ -1.84
LDB2O43679 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB2O43679 RN7SKP18-201ENST00000516005 275 ntBASIC3.54□□□□□ -1.84
LDB2O43679 RNU2-27P-201ENST00000516185 142 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB2O43679 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB2O43679 IGKV2D-19-201ENST00000523346 262 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AC109635.3-201ENST00000529536 185 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AP000857.1-201ENST00000532151 543 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AL133271.1-201ENST00000538229 291 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AL512360.1-201ENST00000555346 234 ntBASIC3.54□□□□□ -1.84
LDB2O43679 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.54□□□□□ -1.84
LDB2O43679 AC006270.2-201ENST00000578523 652 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AL136363.1-201ENST00000605349 337 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AL158211.4-201ENST00000606988 584 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AP001330.5-201ENST00000607176 411 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AL355073.2-201ENST00000612106 557 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AC006338.1-201ENST00000618453 749 ntBASIC3.54□□□□□ -1.84
LDB2O43679 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AC022149.2-201ENST00000621061 203 ntBASIC3.54□□□□□ -1.84
LDB2O43679 AC009161.2-201ENST00000624626 138 ntBASIC3.54□□□□□ -1.84
LDB2O43679 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.54□□□□□ -1.84
LDB2O43679 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.54□□□□□ -1.84
LDB2O43679 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LDB2O43679 MTCO1P9-201ENST00000505577 1534 ntBASIC3.54□□□□□ -1.84
LDB2O43679 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LDB2O43679 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB2O43679 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB2O43679 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 OR1S2-201ENST00000302592 978 ntBASIC3.53□□□□□ -1.84
LDB2O43679 MIR208A-201ENST00000362287 71 ntBASIC3.53□□□□□ -1.84
LDB2O43679 SNORA63.1-201ENST00000362493 131 ntBASIC3.53□□□□□ -1.84
LDB2O43679 RNU6-1249P-201ENST00000363237 111 ntBASIC3.53□□□□□ -1.84
LDB2O43679 RNU6-1097P-201ENST00000363586 107 ntBASIC3.53□□□□□ -1.84
LDB2O43679 RNU1-39P-201ENST00000383897 165 ntBASIC3.53□□□□□ -1.84
LDB2O43679 Y_RNA.481-201ENST00000384373 102 ntBASIC3.53□□□□□ -1.84
LDB2O43679 MIR23A-201ENST00000385245 73 ntBASIC3.53□□□□□ -1.84
LDB2O43679 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LDB2O43679 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.53□□□□□ -1.84
LDB2O43679 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB2O43679 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB2O43679 CCDC58P2-201ENST00000417131 366 ntBASIC3.53□□□□□ -1.84
LDB2O43679 MTATP6P18-201ENST00000417994 673 ntBASIC3.53□□□□□ -1.84
LDB2O43679 AC068533.1-201ENST00000418542 415 ntBASIC3.53□□□□□ -1.84
LDB2O43679 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 AL137014.1-201ENST00000420490 1226 ntBASIC3.53□□□□□ -1.84
LDB2O43679 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB2O43679 OR4K11P-201ENST00000431829 904 ntBASIC3.53□□□□□ -1.84
LDB2O43679 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 GPR143P-201ENST00000434155 205 ntBASIC3.53□□□□□ -1.84
LDB2O43679 RPL35AP22-201ENST00000436855 335 ntBASIC3.53□□□□□ -1.84
LDB2O43679 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 AC027673.1-201ENST00000456245 405 ntBASIC3.53□□□□□ -1.84
LDB2O43679 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 AC068305.1-201ENST00000497406 726 ntBASIC3.53□□□□□ -1.84
LDB2O43679 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB2O43679 AC090572.1-201ENST00000519251 160 ntBASIC3.53□□□□□ -1.84
LDB2O43679 AC011979.2-201ENST00000527568 352 ntBASIC3.53□□□□□ -1.84
LDB2O43679 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 AL133153.1-201ENST00000557756 303 ntBASIC3.53□□□□□ -1.84
LDB2O43679 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.53□□□□□ -1.84
LDB2O43679 AC025678.1-201ENST00000567861 338 ntBASIC3.53□□□□□ -1.84
LDB2O43679 AC010591.1-201ENST00000603941 649 ntBASIC3.53□□□□□ -1.84
LDB2O43679 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB2O43679 TUG1_1.1-201ENST00000610654 145 ntBASIC3.53□□□□□ -1.84
LDB2O43679 U4.6-201ENST00000621618 127 ntBASIC3.53□□□□□ -1.84
LDB2O43679 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB2O43679 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB2O43679 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB2O43679 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
LDB2O43679 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB2O43679 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.53□□□□□ -1.84
LDB2O43679 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.53□□□□□ -1.84
LDB2O43679 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LDB2O43679 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
LDB2O43679 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
LDB2O43679 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
LDB2O43679 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 232.2 ms