Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RPL37P25-201ENST00000507308 276 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AC010460.2-201ENST00000509054 677 ntBASIC2.53□□□□□ -2
CHMP2AO43633 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.53□□□□□ -2
CHMP2AO43633 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.53□□□□□ -2
CHMP2AO43633 AC009063.1-201ENST00000563342 702 ntBASIC2.53□□□□□ -2
CHMP2AO43633 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.53□□□□□ -2
CHMP2AO43633 BNIP3P24-201ENST00000593398 557 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AL445435.1-201ENST00000604232 665 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.53□□□□□ -2
CHMP2AO43633 AC084824.5-201ENST00000612009 413 ntBASIC2.53□□□□□ -2
CHMP2AO43633 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.53□□□□□ -2
CHMP2AO43633 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CHMP2AO43633 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CHMP2AO43633 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CHMP2AO43633 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.52□□□□□ -2.01
CHMP2AO43633 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.52□□□□□ -2.01
CHMP2AO43633 OR4G2P-202ENST00000641004 1759 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHMP2AO43633 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 U8.2-201ENST00000363156 134 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 SNRPEP2-201ENST00000397592 279 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AL356131.1-201ENST00000405826 414 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 VN1R51P-201ENST00000411675 945 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AC069282.1-201ENST00000411911 526 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.52□□□□□ -2.01
CHMP2AO43633 SPA17P1-201ENST00000416656 452 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.52□□□□□ -2.01
CHMP2AO43633 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.52□□□□□ -2.01
CHMP2AO43633 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHMP2AO43633 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.52□□□□□ -2.01
CHMP2AO43633 AL445687.1-201ENST00000439946 251 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AC093155.1-201ENST00000440164 826 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.52□□□□□ -2.01
CHMP2AO43633 AL353705.4-201ENST00000449661 238 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 BOLA3P3-201ENST00000505182 232 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AC008716.1-201ENST00000511084 513 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 RNU6-1256P-201ENST00000516539 103 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.52□□□□□ -2.01
CHMP2AO43633 COX6CP5-201ENST00000527162 228 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AP001542.2-201ENST00000593141 364 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AL355877.2-201ENST00000603670 358 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.52□□□□□ -2.01
CHMP2AO43633 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AC079395.3-201ENST00000615161 484 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 AC004009.2-201ENST00000623016 728 ntBASIC2.52□□□□□ -2.01
CHMP2AO43633 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHMP2AO43633 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CHMP2AO43633 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP2AO43633 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP2AO43633 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP2AO43633 Y_RNA.408-201ENST00000383987 102 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 RNU1-138P-201ENST00000384093 164 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AL591416.1-201ENST00000404015 867 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 RNA5SP425-201ENST00000410336 112 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 RN7SKP223-201ENST00000410582 62 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 Z85995.1-201ENST00000415547 335 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 OOSP1P1-201ENST00000423265 274 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AC013262.1-201ENST00000426710 252 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AL590233.1-201ENST00000430017 456 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 OR4K11P-201ENST00000431829 904 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 MTND2P5-201ENST00000432656 1006 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 UBE2V1P13-201ENST00000436983 439 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AC092393.1-201ENST00000439625 742 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.51□□□□□ -2.01
CHMP2AO43633 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.51□□□□□ -2.01
CHMP2AO43633 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.51□□□□□ -2.01
CHMP2AO43633 RNU7-23P-201ENST00000459465 62 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 LARP1BP2-201ENST00000486594 519 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AC022483.1-201ENST00000514020 567 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 SNORA31.22-201ENST00000517204 135 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.51□□□□□ -2.01
CHMP2AO43633 AC092451.2-201ENST00000538746 658 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP2AO43633 TRAV28-201ENST00000557548 323 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 MIR4666A-201ENST00000580160 79 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AC120053.1-201ENST00000607706 736 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.51□□□□□ -2.01
CHMP2AO43633 AL512427.1-201ENST00000618593 349 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 AC006927.2-201ENST00000639256 389 ntBASIC2.51□□□□□ -2.01
CHMP2AO43633 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
CHMP2AO43633 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP2AO43633 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP2AO43633 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHMP2AO43633 RNU6-707P-201ENST00000364647 95 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 RNU6-76P-201ENST00000384060 104 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 TAS2R15P-201ENST00000390674 928 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 LUZP4P1-201ENST00000415420 344 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 AL135786.1-201ENST00000415892 214 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 AL358075.3-201ENST00000426289 226 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 AL139415.2-201ENST00000431968 163 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 FGF7P5-201ENST00000441829 291 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 FAM103A2P-201ENST00000444122 354 ntBASIC2.5□□□□□ -2.01
CHMP2AO43633 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.5□□□□□ -2.01
CHMP2AO43633 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms